Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL136964.1-201ENST00000622038 2990 ntBASIC5.05□□□□□ -1.6
NEK3P51956 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.05□□□□□ -1.6
NEK3P51956 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NEK3P51956 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.05□□□□□ -1.6
NEK3P51956 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
NEK3P51956 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.05□□□□□ -1.6
NEK3P51956 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 GDI2P1-201ENST00000429312 1336 ntBASIC5.04□□□□□ -1.6
NEK3P51956 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 ZNF734P-201ENST00000419494 1534 ntBASIC5.04□□□□□ -1.6
NEK3P51956 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NEK3P51956 RNU6-657P-201ENST00000383904 107 ntBASIC5.04□□□□□ -1.6
NEK3P51956 MIR585-201ENST00000384887 94 ntBASIC5.04□□□□□ -1.6
NEK3P51956 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 LINC00993-201ENST00000420453 540 ntBASIC5.04□□□□□ -1.6
NEK3P51956 CKS1BP6-201ENST00000424932 240 ntBASIC5.04□□□□□ -1.6
NEK3P51956 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 CETN4P-201ENST00000432407 469 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 AL008629.1-201ENST00000438615 184 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC092427.1-201ENST00000439177 601 ntBASIC5.04□□□□□ -1.6
NEK3P51956 RPS29P9-201ENST00000440360 171 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 VN1R10P-201ENST00000447106 875 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 CEACAMP6-201ENST00000452007 574 ntBASIC5.04□□□□□ -1.6
NEK3P51956 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 AL691482.1-201ENST00000453255 87 ntBASIC5.04□□□□□ -1.6
NEK3P51956 RPL18AP17-201ENST00000455326 198 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC092757.1-201ENST00000467293 467 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC112206.1-201ENST00000468416 477 ntBASIC5.04□□□□□ -1.6
NEK3P51956 NCOR1P1-202ENST00000486162 291 ntBASIC5.04□□□□□ -1.6
NEK3P51956 MTCYBP35-201ENST00000503630 1137 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC114981.1-201ENST00000503897 678 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.04□□□□□ -1.6
NEK3P51956 UBTFL10-201ENST00000528532 562 ntBASIC5.04□□□□□ -1.6
NEK3P51956 DUXAP5-201ENST00000529668 529 ntBASIC5.04□□□□□ -1.6
NEK3P51956 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 AC009117.1-201ENST00000563948 554 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
NEK3P51956 MIR4700-201ENST00000578311 74 ntBASIC5.04□□□□□ -1.6
NEK3P51956 MIR4480-201ENST00000582492 71 ntBASIC5.04□□□□□ -1.6
NEK3P51956 OR4G1P-201ENST00000588632 938 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL355812.1-201ENST00000603215 216 ntBASIC5.04□□□□□ -1.6
NEK3P51956 RNF138P2-201ENST00000603490 592 ntBASIC5.04□□□□□ -1.6
NEK3P51956 YWHAQP7-201ENST00000603536 658 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL353600.1-201ENST00000608148 251 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC007490.1-201ENST00000624321 703 ntBASIC5.04□□□□□ -1.6
NEK3P51956 NMD3P1-201ENST00000439704 1488 ntBASIC5.04□□□□□ -1.6
NEK3P51956 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.04□□□□□ -1.6
NEK3P51956 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NEK3P51956 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AC008758.3-201ENST00000507003 1829 ntBASIC5.04□□□□□ -1.6
NEK3P51956 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NEK3P51956 IRF5P1-201ENST00000504852 2164 ntBASIC5.04□□□□□ -1.6
NEK3P51956 AL079343.1-201ENST00000572358 1771 ntBASIC5.04□□□□□ -1.6
NEK3P51956 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 IL6STP1-201ENST00000346911 1020 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AF186996.5-201ENST00000418098 904 ntBASIC5.03□□□□□ -1.6
NEK3P51956 OFD1P18Y-201ENST00000420889 959 ntBASIC5.03□□□□□ -1.6
NEK3P51956 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 KCTD10P1-201ENST00000434203 625 ntBASIC5.03□□□□□ -1.6
NEK3P51956 YWHAZP7-201ENST00000436906 631 ntBASIC5.03□□□□□ -1.6
NEK3P51956 NPM1P33-201ENST00000438918 872 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AL450023.3-201ENST00000440592 271 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 OR52J1P-201ENST00000450596 932 ntBASIC5.03□□□□□ -1.6
NEK3P51956 RPL26P28-201ENST00000451325 435 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC091685.2-201ENST00000454924 864 ntBASIC5.03□□□□□ -1.6
NEK3P51956 MTCO3P11-201ENST00000455103 774 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.03□□□□□ -1.6
NEK3P51956 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.03□□□□□ -1.6
NEK3P51956 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 AC092324.1-201ENST00000468671 324 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.03□□□□□ -1.6
NEK3P51956 AC068587.2-201ENST00000478386 781 ntBASIC5.03□□□□□ -1.6
NEK3P51956 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms