Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AP000916.1-201ENST00000533869 835 ntBASIC3.7□□□□□ -1.82
CENPFP49454 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPFP49454 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.7□□□□□ -1.82
CENPFP49454 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPFP49454 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPFP49454 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CENPFP49454 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.7□□□□□ -1.82
CENPFP49454 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPFP49454 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPFP49454 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CENPFP49454 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CENPFP49454 RPL31P50-201ENST00000471002 296 ntBASIC3.69□□□□□ -1.82
CENPFP49454 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPFP49454 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPFP49454 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPFP49454 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CENPFP49454 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPFP49454 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CENPFP49454 RNA5SP42-201ENST00000364278 115 ntBASIC3.69□□□□□ -1.82
CENPFP49454 AC140076.1-201ENST00000449897 361 ntBASIC3.69□□□□□ -1.82
CENPFP49454 AC128713.1-201ENST00000471495 306 ntBASIC3.69□□□□□ -1.82
CENPFP49454 PPBPP1-201ENST00000510807 373 ntBASIC3.69□□□□□ -1.82
CENPFP49454 H3F3AP1-201ENST00000559984 334 ntBASIC3.69□□□□□ -1.82
CENPFP49454 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.69□□□□□ -1.82
CENPFP49454 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CENPFP49454 AL672296.1-201ENST00000427780 2158 ntBASIC3.69□□□□□ -1.82
CENPFP49454 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPFP49454 AL035407.1-201ENST00000429211 571 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.68□□□□□ -1.82
CENPFP49454 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CENPFP49454 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.68□□□□□ -1.82
CENPFP49454 AL096803.3-201ENST00000609032 532 ntBASIC3.68□□□□□ -1.82
CENPFP49454 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.68□□□□□ -1.82
CENPFP49454 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CENPFP49454 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.68□□□□□ -1.82
CENPFP49454 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CENPFP49454 AL603825.1-201ENST00000438481 80 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.68□□□□□ -1.82
CENPFP49454 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.68□□□□□ -1.82
CENPFP49454 AL133457.1-201ENST00000564251 987 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.68□□□□□ -1.82
CENPFP49454 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 HCFC2P1-201ENST00000392864 1592 ntBASIC3.68□□□□□ -1.82
CENPFP49454 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 AC010168.2-201ENST00000562691 5428 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.68□□□□□ -1.82
CENPFP49454 CR383658.2-201ENST00000547576 1525 ntBASIC3.68□□□□□ -1.82
CENPFP49454 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CENPFP49454 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CENPFP49454 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CENPFP49454 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CENPFP49454 AC005189.1-201ENST00000431286 310 ntBASIC3.68□□□□□ -1.82
CENPFP49454 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.68□□□□□ -1.82
CENPFP49454 SNRPCP3-201ENST00000474888 476 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.68□□□□□ -1.82
CENPFP49454 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.68□□□□□ -1.82
CENPFP49454 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
CENPFP49454 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.68□□□□□ -1.82
CENPFP49454 AC090312.2-201ENST00000582687 378 ntBASIC3.68□□□□□ -1.82
CENPFP49454 AL162574.2-201ENST00000614618 657 ntBASIC3.68□□□□□ -1.82
CENPFP49454 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CENPFP49454 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CENPFP49454 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CENPFP49454 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 SNORA67.4-201ENST00000384688 142 ntBASIC3.67□□□□□ -1.82
CENPFP49454 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.67□□□□□ -1.82
CENPFP49454 RNU4-29P-201ENST00000515943 174 ntBASIC3.67□□□□□ -1.82
CENPFP49454 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.67□□□□□ -1.82
CENPFP49454 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 MTND6P33-201ENST00000571794 183 ntBASIC3.67□□□□□ -1.82
CENPFP49454 SNORD91B-202ENST00000608459 222 ntBASIC3.67□□□□□ -1.82
CENPFP49454 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 MTCO1P8-201ENST00000416914 1523 ntBASIC3.67□□□□□ -1.82
CENPFP49454 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CENPFP49454 NEAT1-202ENST00000501122 22743 ntBASIC3.67□□□□□ -1.82
CENPFP49454 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 OR13C3-201ENST00000374781 1108 ntBASIC3.67□□□□□ -1.82
CENPFP49454 AL391417.1-201ENST00000404100 426 ntBASIC3.67□□□□□ -1.82
CENPFP49454 AL353678.1-201ENST00000422735 741 ntBASIC3.67□□□□□ -1.82
CENPFP49454 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.67□□□□□ -1.82
CENPFP49454 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CENPFP49454 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.67□□□□□ -1.82
CENPFP49454 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.67□□□□□ -1.82
CENPFP49454 AC006946.3-201ENST00000609791 756 ntBASIC3.67□□□□□ -1.82
CENPFP49454 AC091905.1-201ENST00000624400 311 ntBASIC3.67□□□□□ -1.82
CENPFP49454 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CENPFP49454 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CENPFP49454 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CENPFP49454 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
CENPFP49454 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms