Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL035404.1-201ENST00000497982 568 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 RPF2P2-201ENST00000504693 896 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 AC108471.1-201ENST00000513977 287 ntBASIC4.48□□□□□ -1.69
LDB2O43679 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.48□□□□□ -1.69
LDB2O43679 DUXAP1-201ENST00000556632 463 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 AC069061.3-201ENST00000582254 823 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 SLC25A36P1-201ENST00000590111 465 ntBASIC4.48□□□□□ -1.69
LDB2O43679 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC008782.1-201ENST00000603386 430 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AL358072.1-201ENST00000604156 575 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AL022161.1-201ENST00000604390 213 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC069545.1-201ENST00000605671 358 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.48□□□□□ -1.69
LDB2O43679 AC091979.2-201ENST00000607514 214 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC020634.1-201ENST00000608701 549 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC019193.2-201ENST00000610012 634 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.48□□□□□ -1.69
LDB2O43679 AC007671.2-201ENST00000637344 619 ntBASIC4.48□□□□□ -1.69
LDB2O43679 AC107027.3-201ENST00000565095 3473 ntBASIC4.48□□□□□ -1.69
LDB2O43679 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.48□□□□□ -1.69
LDB2O43679 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
LDB2O43679 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LDB2O43679 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDB2O43679 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 RNA5SP307-201ENST00000362863 116 ntBASIC4.47□□□□□ -1.69
LDB2O43679 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.47□□□□□ -1.69
LDB2O43679 BMS1P3-201ENST00000372011 932 ntBASIC4.47□□□□□ -1.69
LDB2O43679 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LDB2O43679 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LDB2O43679 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.47□□□□□ -1.69
LDB2O43679 RSL24D1P4-201ENST00000400938 484 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AL590290.1-201ENST00000405336 380 ntBASIC4.47□□□□□ -1.69
LDB2O43679 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.47□□□□□ -1.69
LDB2O43679 MORF4L1P6-201ENST00000418771 268 ntBASIC4.47□□□□□ -1.69
LDB2O43679 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
LDB2O43679 RPEP3-201ENST00000425462 676 ntBASIC4.47□□□□□ -1.69
LDB2O43679 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 AL009174.1-201ENST00000426577 416 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.47□□□□□ -1.69
LDB2O43679 NPM1P33-201ENST00000438918 872 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.47□□□□□ -1.69
LDB2O43679 HMGB1P16-201ENST00000447155 540 ntBASIC4.47□□□□□ -1.69
LDB2O43679 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.47□□□□□ -1.69
LDB2O43679 RPL10P17-201ENST00000453852 316 ntBASIC4.47□□□□□ -1.69
LDB2O43679 DDX39BP2-208ENST00000453923 258 ntBASIC4.47□□□□□ -1.69
LDB2O43679 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 HMGB1P23-201ENST00000518743 568 ntBASIC4.47□□□□□ -1.69
LDB2O43679 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.47□□□□□ -1.69
LDB2O43679 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 AP001317.1-201ENST00000531194 960 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AP000619.3-201ENST00000535634 1127 ntBASIC4.47□□□□□ -1.69
LDB2O43679 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.47□□□□□ -1.69
LDB2O43679 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.47□□□□□ -1.69
LDB2O43679 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 AC090888.1-201ENST00000561335 1141 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AC084783.1-201ENST00000565846 910 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AC090312.2-201ENST00000582687 378 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.47□□□□□ -1.69
LDB2O43679 AC115286.1-201ENST00000604298 434 ntBASIC4.47□□□□□ -1.69
LDB2O43679 uc_338.9-201ENST00000617424 182 ntBASIC4.47□□□□□ -1.69
LDB2O43679 AL731566.2-201ENST00000618971 317 ntBASIC4.47□□□□□ -1.69
LDB2O43679 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LDB2O43679 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms