Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 PWAR6-201ENST00000552334 4618 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORD46.1-201ENST00000364139 104 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OR13C3-201ENST00000374781 1108 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNA5SP424-201ENST00000390988 115 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 HMGB3P20-201ENST00000417997 600 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL691447.1-201ENST00000419456 387 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TCEA1P2-201ENST00000420496 906 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPL7P53-201ENST00000421245 739 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MTND4LP13-201ENST00000425022 298 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC017083.1-201ENST00000428093 483 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC091286.1-201ENST00000431233 461 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 HMGN2P31-201ENST00000432430 273 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL138787.1-202ENST00000437804 898 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC099063.2-201ENST00000446360 662 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPS3AP46-201ENST00000448352 682 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNU7-170P-201ENST00000459303 61 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPL7P48-201ENST00000461513 746 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC004801.2-202ENST00000463559 283 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPL23AP73-201ENST00000492507 471 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC104619.4-201ENST00000510773 249 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA70.14-201ENST00000516205 110 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 IGKV2D-19-201ENST00000523346 262 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL121766.1-201ENST00000547436 487 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CYP2C60P-201ENST00000566088 139 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 U3.45-201ENST00000607547 219 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC096586.2-201ENST00000610260 441 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC008121.2-201ENST00000614647 523 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.93□□□□□ -1.94
TCRBV4S1A1TA0A5B7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNU6-283P-201ENST00000364788 107 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MIR218-2-201ENST00000385006 110 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC098592.2-201ENST00000413158 265 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL353597.2-202ENST00000434901 373 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CASP3P1-201ENST00000446037 609 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 IFNWP4-201ENST00000453148 294 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC006499.5-201ENST00000505037 514 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC026784.1-201ENST00000507986 352 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MIR4738-201ENST00000579134 87 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC010591.1-201ENST00000603941 649 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA62.6-201ENST00000606322 83 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL592295.2-201ENST00000612578 206 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC079684.1-201ENST00000621405 437 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 EXOC5P1-201ENST00000510543 1969 ntBASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.92□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL049555.1-201ENST00000562834 1933 ntBASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL021368.2-201ENST00000606125 5352 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms