Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL10P17-201ENST00000453852 316 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 DDX39BP2-208ENST00000453923 258 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC099560.2-201ENST00000457554 255 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC074386.1-201ENST00000476560 767 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 LINC00888-204ENST00000487386 421 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC011005.3-201ENST00000491624 395 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC011352.3-201ENST00000505162 593 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 STMN1P2-201ENST00000508435 439 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-885P-201ENST00000516607 104 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AP001207.1-201ENST00000524051 481 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 HIGD1AP17-201ENST00000554576 276 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL133338.2-201ENST00000604292 736 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 Z98200.1-201ENST00000607298 470 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC020634.1-201ENST00000608701 549 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AP000894.4-201ENST00000610185 483 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL139418.1-201ENST00000613613 177 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC006065.6-201ENST00000625201 545 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC053481.2-202ENST00000582394 1500 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC005332.5-201ENST00000591222 2919 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 USP9YP4-201ENST00000424401 1745 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MTND5P31-201ENST00000419366 1374 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL118496.1-201ENST00000440201 1812 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 SDAD1P1-202ENST00000524156 2051 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-931P-201ENST00000363850 107 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 Y_RNA.408-201ENST00000383987 102 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RN7SKP106-201ENST00000410832 272 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 LUZP4P1-201ENST00000415420 344 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 DPPA2P2-201ENST00000418220 897 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CENPIP1-201ENST00000425713 902 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RPS12P10-201ENST00000427031 377 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC005345.1-201ENST00000431868 217 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL050321.1-201ENST00000432363 400 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL354941.1-201ENST00000438600 464 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MTCYBP34-201ENST00000439552 670 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CEACAMP6-201ENST00000452007 574 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RPL7AP10-201ENST00000481016 791 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 NDUFB5P1-201ENST00000508134 564 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 OR5BM1P-201ENST00000512021 366 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC044860.2-201ENST00000561005 179 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 RPL23AP97-201ENST00000568955 471 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MIR3934-201ENST00000579806 107 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 MIR4436B2-201ENST00000581415 91 ntBASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.54□□□□□ -1.68
TCRBV7S3A2A0A539 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms