Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 MIR5186-201ENST00000577504 120 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC104687.2-201ENST00000604442 342 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC079248.2-201ENST00000623779 326 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 U6.101-201ENST00000637707 76 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 AC073869.10-201ENST00000642016 354 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 MTND5P24-201ENST00000438892 1767 ntBASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A3BPQ9Y5P4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 PABPC1P7-201ENST00000413177 1513 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 Y_RNA.18-201ENST00000362461 102 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 SNORA77-201ENST00000408716 125 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AL953862.1-201ENST00000423016 168 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AL049610.1-201ENST00000423374 372 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 KCTD10P1-201ENST00000434203 625 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 TMX2P1-201ENST00000436507 708 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 RPS29P9-201ENST00000440360 171 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC097493.1-201ENST00000463958 372 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 RPL21P103-201ENST00000479921 488 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC140172.1-201ENST00000502928 141 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC010486.3-201ENST00000511602 785 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 FTH1P11-201ENST00000517577 551 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC105031.1-201ENST00000518550 476 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 OR8L1P-201ENST00000534005 955 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 MIR3934-201ENST00000579806 107 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 OR4G1P-201ENST00000588632 938 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC011487.3-201ENST00000593607 453 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AP000811.1-201ENST00000603803 651 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC010680.4-201ENST00000605334 543 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC099669.2-201ENST00000616549 437 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AC009318.4-201ENST00000620496 486 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 AP001784.1-201ENST00000624107 428 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 CYP3A51P-201ENST00000633513 256 ntBASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A3BPQ9Y5P4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 AC009951.1-201ENST00000623674 2614 ntBASIC5.59□□□□□ -1.52
COL4A3BPQ9Y5P4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 DDX43P2-201ENST00000604753 1354 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC087359.1-201ENST00000508335 1740 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 Z97832.1-201ENST00000402490 328 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 CHEK2P3-201ENST00000416118 248 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 OR2AM1P-201ENST00000422137 422 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 OR7E125P-201ENST00000443450 846 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 Z83846.1-201ENST00000446798 265 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL29P29-201ENST00000448725 423 ntBASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL4A3BPQ9Y5P4 RPS3AP41-201ENST00000462701 778 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms