Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MRPL50P1-201ENST00000431951 384 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC114495.1-201ENST00000441274 436 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 RPL21P89-201ENST00000444021 467 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 snoU13.22-201ENST00000459428 104 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 MTCO3P27-201ENST00000514397 196 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC023632.4-201ENST00000517783 191 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC091488.1-201ENST00000604239 660 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC008759.3-201ENST00000613300 508 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AL353726.1-201ENST00000614041 1000 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AL109659.3-201ENST00000624985 950 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND4P26-201ENST00000415971 1359 ntBASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
PCDHGA1Q9Y5H4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AL161912.2-201ENST00000565707 3007 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR372-201ENST00000362225 67 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RNA5SP283-201ENST00000365604 119 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RNU6-356P-201ENST00000384140 107 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR153-1-201ENST00000384914 90 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RNA5SP44-201ENST00000410446 133 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SKP159-201ENST00000410657 292 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RNU6-272P-201ENST00000411028 104 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 EIF4HP2-201ENST00000424380 563 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CKS1BP6-201ENST00000424932 240 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RRM2P4-201ENST00000441721 562 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC004865.1-201ENST00000442276 1003 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC233982.1-201ENST00000451247 436 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC073522.1-201ENST00000483312 377 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SL691P-201ENST00000494487 301 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC108064.1-201ENST00000513791 460 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AL352979.3-201ENST00000553515 247 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC053481.3-201ENST00000577881 843 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC017100.2-201ENST00000584628 355 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC005255.1-201ENST00000593748 216 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC023762.1-201ENST00000603280 584 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AL451086.1-201ENST00000605596 223 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC097505.1-201ENST00000610199 565 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC078880.5-201ENST00000617845 421 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC004943.3-201ENST00000624116 600 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA1Q9Y5H4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC008549.2-201ENST00000333482 706 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 HMGB3P19-201ENST00000403971 560 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC004987.3-201ENST00000413879 771 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 SNRPFP1-201ENST00000414761 252 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 HMGB3P5-201ENST00000428894 612 ntBASIC4.24□□□□□ -1.73
PCDHGA1Q9Y5H4 AL096803.2-201ENST00000450032 677 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms