Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA6Q9Y5G7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA6Q9Y5G7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL078621.3-201ENST00000623707 2042 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 RNA5SP443-201ENST00000363083 132 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 RNU6-433P-201ENST00000363216 104 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 Y_RNA.559-201ENST00000384686 107 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC007066.1-201ENST00000392902 381 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL133388.1-201ENST00000404509 287 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 BTBD10P2-201ENST00000404779 676 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 VN1R8P-201ENST00000407739 893 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 U3.36-201ENST00000408418 213 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 MIR320C1-201ENST00000408566 88 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CENPIP1-201ENST00000425713 902 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 NPM1P34-201ENST00000428821 893 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 COX6CP12-201ENST00000446748 202 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC073850.1-201ENST00000449243 255 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL591623.2-201ENST00000449978 222 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 GAPDHP14-201ENST00000450472 937 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 RPL30P9-201ENST00000465586 330 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 RPS18P6-201ENST00000476880 458 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC106872.3-201ENST00000495104 446 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC090453.1-201ENST00000495560 436 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 POU5F1P7-201ENST00000508759 541 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC098976.1-201ENST00000513014 541 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 RNU2-30P-201ENST00000516209 141 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CDH12P4-201ENST00000517835 295 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CDH12P3-201ENST00000517935 295 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC104986.1-201ENST00000517978 436 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CDH12P1-201ENST00000518435 295 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC060788.1-201ENST00000521318 469 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 NMNAT1P5-201ENST00000559657 841 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC006362.1-201ENST00000567392 174 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 MIR3691-201ENST00000578066 90 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC083760.1-201ENST00000589621 670 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL391497.1-201ENST00000608671 547 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AL049539.1-201ENST00000611964 459 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AP002799.1-201ENST00000623552 423 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC023421.1-201ENST00000590535 1785 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 AC130650.2-201ENST00000618736 2403 ntBASIC5.11□□□□□ -1.59
PCDHGA6Q9Y5G7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RPL23AP57-201ENST00000332361 466 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 SNORA17.1-201ENST00000362945 126 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RNU1-43P-201ENST00000365052 165 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RNU1-106P-201ENST00000384382 164 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 EIF5P1-201ENST00000400019 1231 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AL121972.1-201ENST00000402023 252 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RPS24P12-201ENST00000402084 394 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 PPIAP9-201ENST00000403866 498 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 PGBD4P8-201ENST00000412993 562 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RPL17P12-201ENST00000413391 526 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RPSAP35-201ENST00000413753 818 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 MTCO2P34-201ENST00000421994 607 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 RPS27AP14-201ENST00000422868 454 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 KCTD10P1-201ENST00000434203 625 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 GSTM5P1-201ENST00000434751 660 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AC092641.1-201ENST00000440229 772 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.1□□□□□ -1.59
PCDHGA6Q9Y5G7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms