Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSX2IPQ9Y2D8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSX2IPQ9Y2D8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSX2IPQ9Y2D8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSX2IPQ9Y2D8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ZFRP1-201ENST00000457579 2970 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC063976.2-201ENST00000425667 3556 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 FAM3C2-201ENST00000312214 681 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL590240.1-201ENST00000334118 313 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 SNORD113.2-201ENST00000364166 89 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 OR1L1-202ENST00000373686 1083 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 TAF9BP1-201ENST00000396646 746 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RNU6-575P-201ENST00000411326 105 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC098592.1-201ENST00000419352 333 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 PAICSP7-201ENST00000419829 962 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 GAPDHP49-201ENST00000421421 961 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL590609.2-201ENST00000421430 368 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL139421.1-201ENST00000423010 169 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 GTF2IP23-201ENST00000423746 351 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL035407.1-201ENST00000429211 571 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 OR2B7P-201ENST00000429302 934 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ISCA1P2-201ENST00000438679 421 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 USP9YP22-201ENST00000438971 294 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL035551.1-201ENST00000446931 348 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 HMGB1P16-201ENST00000447155 540 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC000111.2-201ENST00000448200 210 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC079776.3-201ENST00000450665 370 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RPL21P134-201ENST00000453468 483 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 BX248409.1-201ENST00000455497 255 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL445433.1-201ENST00000457507 257 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 CYCSP34-201ENST00000458172 304 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RN7SL517P-201ENST00000462240 305 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 SYPL1P1-201ENST00000473622 768 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RPL12P20-201ENST00000475538 479 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 MTCO1P49-201ENST00000523429 802 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL110118.1-201ENST00000553543 400 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 VN1R82P-201ENST00000601481 356 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AL590229.1-201ENST00000603497 542 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 OR2AS2P-201ENST00000606902 342 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 MIR8069-1-201ENST00000616627 86 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 MIR8069-2-201ENST00000621412 86 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AP003497.2-201ENST00000624220 967 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01355-201ENST00000566551 5444 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC107068.1-201ENST00000563286 4218 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AP000776.1-201ENST00000530032 1663 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 AC139713.2-215ENST00000641428 5037 ntBASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX2IPQ9Y2D8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AC008549.2-201ENST00000333482 706 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 RNU6-623P-201ENST00000363143 105 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AL590084.2-201ENST00000401481 382 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AL357515.1-201ENST00000402967 542 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AL049697.2-201ENST00000403708 294 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AL356967.1-201ENST00000406305 431 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 RN7SKP267-201ENST00000410381 285 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00993-201ENST00000420453 540 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 RPL23AP76-201ENST00000441860 458 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 ARL2BPP10-201ENST00000446487 531 ntBASIC5.13□□□□□ -1.59
SSX2IPQ9Y2D8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms