Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 IGHV3-32-201ENST00000519182 355 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LINC00557-201ENST00000563184 1279 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 CYP2C60P-201ENST00000566088 139 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC012557.1-201ENST00000607115 611 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL096803.3-201ENST00000609032 532 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AL592295.2-201ENST00000612578 206 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 RNVU1-4-201ENST00000612985 164 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC091948.2-201ENST00000636510 279 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 AC009452.1-201ENST00000640823 606 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 RLIMP1-201ENST00000339626 1680 ntBASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRAPPC4Q9Y296 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RNU6-666P-201ENST00000363499 107 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RNU1-13P-201ENST00000384499 162 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RNU6-244P-201ENST00000391028 104 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL357078.2-201ENST00000416486 427 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC007529.1-201ENST00000418574 2178 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC048351.1-201ENST00000420064 602 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL691449.1-201ENST00000426570 421 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC007000.2-201ENST00000442564 487 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RPL21P11-201ENST00000461458 483 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC110792.1-201ENST00000491826 472 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 MTCO1P35-201ENST00000515270 228 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RNU6-1004P-201ENST00000516584 111 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC008083.2-201ENST00000546707 476 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 SS18L2P2-201ENST00000583960 235 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL049844.2-201ENST00000604280 628 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AL390816.3-201ENST00000604527 1066 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 AC015849.2-201ENST00000605738 409 ntBASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRAPPC4Q9Y296 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AP002001.2-201ENST00000529025 1469 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 RPL21P65-201ENST00000406094 466 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL353692.2-201ENST00000407054 335 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 RNA5SP239-201ENST00000410218 129 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 RNA5SP498-201ENST00000411342 120 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 MORF4L1P7-201ENST00000426038 703 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 MTND4P15-201ENST00000437913 1033 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 RPS11P1-201ENST00000451072 473 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC107398.1-201ENST00000486904 505 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC103833.1-201ENST00000517442 172 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL049870.4-201ENST00000555741 486 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 AC007224.1-201ENST00000564410 144 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 CBX3P2-202ENST00000583365 535 ntBASIC3.56□□□□□ -1.84
TRAPPC4Q9Y296 VN1R84P-201ENST00000593697 235 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms