Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MIR5188-201ENST00000583467 113 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC064801.1-201ENST00000612025 407 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 MIR4272-201ENST00000635924 64 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 AC112243.1-201ENST00000623949 3851 ntBASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
TRIM35Q9UPQ4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AL121886.1-201ENST00000358609 435 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 Y_RNA.83-201ENST00000363005 113 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-1154P-201ENST00000391001 104 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC012075.1-201ENST00000436549 580 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AL162388.1-201ENST00000450912 352 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 RN7SL39P-201ENST00000462264 297 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC044810.1-201ENST00000480271 711 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC021146.3-201ENST00000511911 260 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC107393.1-201ENST00000512403 346 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC093816.1-201ENST00000515076 913 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LSM3P2-201ENST00000551246 273 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 TPRX1P1-201ENST00000557620 319 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 MIR3146-201ENST00000580367 79 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 MIR6085-201ENST00000618314 110 ntBASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
TRIM35Q9UPQ4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.46□□□□□ -1.05
TRIM35Q9UPQ4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.126-201ENST00000363382 111 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RNU5A-8P-201ENST00000364102 114 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RN7SKP171-201ENST00000364417 303 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-39P-201ENST00000384344 107 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RPL21P50-201ENST00000417698 477 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AC068533.1-201ENST00000418542 415 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 BX284632.2-201ENST00000421091 399 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 MTATP6P16-201ENST00000434543 526 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RPS3AP12-201ENST00000443616 753 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AL359955.2-201ENST00000445380 353 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AC002381.1-201ENST00000447049 280 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AL935212.3-201ENST00000450729 284 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 NANOGP10-201ENST00000453325 895 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 MTCO3P8-201ENST00000453691 755 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RPS15AP17-201ENST00000470598 390 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 AC104563.1-201ENST00000476147 376 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RNA5SP418-201ENST00000515951 117 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RNU7-200P-201ENST00000516105 62 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 SNORA72.7-201ENST00000516349 94 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 HIGD1AP6-201ENST00000521833 279 ntBASIC8.46□□□□□ -1.06
TRIM35Q9UPQ4 RPA2P1-201ENST00000556557 721 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms