Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 RPS27AP11-201ENST00000402798 447 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 ELOCP19-201ENST00000411919 318 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 FTH1P1-201ENST00000437933 532 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 SNORD108-201ENST00000459332 71 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC007687.1-201ENST00000602704 304 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC099669.2-201ENST00000616549 437 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AL357559.1-201ENST00000622228 274 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AP003400.2-201ENST00000624036 666 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AP001784.1-201ENST00000624107 428 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 AC021755.1-201ENST00000559747 1447 ntBASIC3.18□□□□□ -1.9
SSR3Q9UNL2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SSR3Q9UNL2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 IGKV7-3-201ENST00000357453 298 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 MIR323B-201ENST00000385269 82 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 RN7SKP278-201ENST00000410504 342 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 GTF2IP23-201ENST00000423746 351 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 BX890604.2-201ENST00000427883 474 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AP000907.1-201ENST00000428428 510 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL645931.1-201ENST00000439737 410 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 TVP23BP2-201ENST00000455082 615 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 CYCSP53-201ENST00000455540 265 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 RPL23AP67-201ENST00000465341 474 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC114967.1-201ENST00000504890 259 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 RN7SL600P-201ENST00000581811 299 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 NPM1P45-201ENST00000583151 559 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC015726.1-201ENST00000602353 681 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 DCAF13P3-201ENST00000561147 1334 ntBASIC3.17□□□□□ -1.9
SSR3Q9UNL2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSR3Q9UNL2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms