Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC234782.4-201ENST00000417646 1048 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC092651.1-201ENST00000426110 312 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 MTCO2P12-201ENST00000427426 682 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 RPS3AP38-201ENST00000435889 763 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 MTCYBP6-201ENST00000441810 138 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC064862.4-201ENST00000442180 334 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC023141.8-201ENST00000442554 208 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 FHP1-201ENST00000442741 703 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 CBWD4P-201ENST00000445695 655 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 RNU6-261P-201ENST00000459506 102 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC090142.1-201ENST00000465776 462 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 RN7SL101P-201ENST00000496350 279 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 MIR2117-201ENST00000516780 80 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AL109766.1-201ENST00000555080 552 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC007687.1-201ENST00000602704 304 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC009027.1-201ENST00000604510 479 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC023813.4-201ENST00000607580 580 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 RNA5SP440-201ENST00000612665 119 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 RN7SL544P-201ENST00000617232 284 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 RN7SL763P-201ENST00000620922 284 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AL355480.1-201ENST00000629041 99 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AC010149.2-201ENST00000637608 315 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 MTCO1P11-201ENST00000429111 1528 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 U3.23-201ENST00000391132 200 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC087752.1-201ENST00000391360 558 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 RN7SKP32-201ENST00000410167 303 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 RNA5SP178-201ENST00000410380 128 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 GSTM3P2-201ENST00000412746 530 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 SDHDP6-201ENST00000414693 480 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 CHEK2P5-201ENST00000423877 246 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 RPS23P6-201ENST00000466136 431 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 RPSAP51-201ENST00000497462 645 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 snoU109.6-201ENST00000516831 118 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 RNU6-835P-201ENST00000516974 104 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 CYCSP22-201ENST00000517555 339 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 IGKV2-19-201ENST00000518132 283 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC105029.1-201ENST00000520250 669 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 HPRT1P3-201ENST00000539521 576 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC010547.6-201ENST00000571789 193 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 MIR4260-201ENST00000583107 67 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 BNIP3P22-201ENST00000593399 556 ntBASIC6.3□□□□□ -1.4
CNTN3Q9P232 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CNTN3Q9P232 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNTN3Q9P232 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms