Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC025884.1-201ENST00000556034 378 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC023575.1-201ENST00000580510 358 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 MIR3939-201ENST00000582614 106 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AC069366.1-201ENST00000583159 838 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 KPNA2P3-201ENST00000584190 848 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AL592436.1-201ENST00000605135 558 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 AF001550.2-201ENST00000636643 217 ntBASIC3.53□□□□□ -1.84
VAPAQ9P0L0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.53□□□□□ -1.84
VAPAQ9P0L0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VAPAQ9P0L0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VAPAQ9P0L0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 U1.1-201ENST00000384101 164 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 RNA5SP424-201ENST00000390988 115 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC009237.5-201ENST00000414271 501 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 HMGB3P20-201ENST00000417997 600 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 MED6P1-201ENST00000439659 713 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AL162151.2-201ENST00000448875 158 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 SNORD108-201ENST00000459332 71 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 RPL9P32-201ENST00000464118 620 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AL049830.2-201ENST00000480072 201 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 HMGB1P21-201ENST00000502313 581 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC016550.3-201ENST00000515706 767 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC008676.3-201ENST00000521237 435 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC009268.1-201ENST00000561352 1203 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC015726.1-201ENST00000602353 681 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 Z82195.1-201ENST00000604558 398 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC115621.1-201ENST00000604653 858 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AP003117.2-201ENST00000606010 545 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 MIR492-201ENST00000638676 116 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 AC006042.3-201ENST00000454684 1469 ntBASIC3.52□□□□□ -1.85
VAPAQ9P0L0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VAPAQ9P0L0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 TCEA1P2-201ENST00000420496 906 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL356806.1-201ENST00000422524 916 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 HMGB1P32-201ENST00000425971 565 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 ELOCP6-201ENST00000429066 328 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 CEACAMP9-201ENST00000442990 513 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 CYCSP53-201ENST00000455540 265 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 ELOCP12-201ENST00000458706 328 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC010285.3-201ENST00000511668 676 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AL163642.2-201ENST00000604722 1019 ntBASIC3.51□□□□□ -1.85
VAPAQ9P0L0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms