Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF680P1-201ENST00000436625 1469 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 RNU6-181P-201ENST00000363225 107 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 RNU4-91P-201ENST00000364778 135 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 Y_RNA.554-201ENST00000384672 102 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL078599.1-201ENST00000402075 293 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 RPSAP35-201ENST00000413753 818 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL590806.1-201ENST00000415818 853 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 UBTFL3-201ENST00000418934 1024 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 USP9YP20-201ENST00000419224 558 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 HMGB1P31-201ENST00000437242 427 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 MTCO3P18-201ENST00000440206 761 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 RPL23AP76-201ENST00000441860 458 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL662791.1-201ENST00000441992 928 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 RPL35AP28-201ENST00000459730 331 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL121769.1-201ENST00000469473 401 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 ATP5LP5-201ENST00000483050 299 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 NIP7P2-201ENST00000485801 544 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC010587.2-201ENST00000511727 448 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 MTND6P2-201ENST00000512226 524 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 TCP11X3P-202ENST00000514289 1254 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC046134.1-201ENST00000514454 666 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC100784.1-201ENST00000522790 310 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC018552.3-201ENST00000567416 561 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 H3F3BP2-201ENST00000583907 357 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL589743.7-201ENST00000612637 233 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC112204.3-201ENST00000623822 332 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AL157786.1-207ENST00000627771 695 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 MTCO1P18-201ENST00000455518 1419 ntBASIC5.48□□□□□ -1.53
CD248Q9HCU0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 RNU6-353P-201ENST00000364266 108 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 RNU6-549P-201ENST00000384433 107 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 RNU1-149P-201ENST00000390870 161 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 SNORD115-47-201ENST00000391226 86 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 Z97055.1-201ENST00000419730 712 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC012498.1-201ENST00000424037 437 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 MTND3P21-201ENST00000433774 331 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 GSTM5P1-201ENST00000434751 660 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 RNA5SP269-201ENST00000459032 137 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC091959.2-201ENST00000477363 321 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 RN7SL97P-201ENST00000486780 299 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 WBP1LP4-201ENST00000505043 344 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 PDCD5P1-201ENST00000543528 309 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 OR1F2P-201ENST00000570470 933 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC090312.1-201ENST00000580637 348 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC090616.5-202ENST00000582111 297 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC005730.3-201ENST00000583067 366 ntBASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD248Q9HCU0 AC068020.1-201ENST00000594215 661 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms