Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AL606662.1-201ENST00000445763 553 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 MTND6P6-201ENST00000478031 263 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 GAPDHP56-201ENST00000506031 988 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC111000.2-201ENST00000507775 550 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 XKRY-201ENST00000510392 1100 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 KRT19P6-201ENST00000510983 209 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC108043.1-201ENST00000512696 574 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 MTCO3P28-201ENST00000513351 515 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 OR5M2P-201ENST00000529003 936 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC133555.2-201ENST00000550213 292 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC009117.1-201ENST00000563948 554 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 RN7SL802P-201ENST00000577858 299 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 MIR5699-201ENST00000578903 90 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC233702.9-201ENST00000581528 203 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 AC006270.3-201ENST00000605967 1036 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AC064807.4-201ENST00000607201 407 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AL136981.2-201ENST00000617319 734 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 AL607023.1-201ENST00000620045 248 ntBASIC5.3□□□□□ -1.56
HPS3Q969F9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HPS3Q969F9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HPS3Q969F9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HPS3Q969F9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HPS3Q969F9 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC015813.6-201ENST00000624409 5808 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.29□□□□□ -1.56
HPS3Q969F9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HPS3Q969F9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HPS3Q969F9 RNU6-253P-201ENST00000384730 105 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 LINC00993-201ENST00000420453 540 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AL451139.1-201ENST00000434718 346 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AL445567.1-201ENST00000439121 144 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 UBE2D3P4-201ENST00000441973 436 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 MTND2P19-201ENST00000449129 1012 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 OR52A4P-201ENST00000472867 958 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 SYPL1P1-201ENST00000473622 768 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 RPL30P11-201ENST00000495304 339 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AC082651.2-201ENST00000496833 166 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 OR5AK1P-201ENST00000524837 922 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HPS3Q969F9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC135279.1-201ENST00000543493 504 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AL031320.1-201ENST00000604177 357 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.29□□□□□ -1.56
HPS3Q969F9 FAM27B-201ENST00000610601 213 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AC005962.2-201ENST00000611427 652 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.29□□□□□ -1.56
HPS3Q969F9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC107081.3-201ENST00000612715 2034 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS3Q969F9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HPS3Q969F9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS3Q969F9 MTND5P31-201ENST00000419366 1374 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AL445523.1-201ENST00000451184 1362 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 SMG1P4-204ENST00000523028 4131 ntBASIC5.29□□□□□ -1.56
HPS3Q969F9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HPS3Q969F9 AC087359.1-201ENST00000508335 1740 ntBASIC5.28□□□□□ -1.56
HPS3Q969F9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HPS3Q969F9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HPS3Q969F9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HPS3Q969F9 NCLP2-201ENST00000416078 1462 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms