Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 AC138649.5-201ENST00000637456 137 ntBASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHKBP1Q8TBC3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC235565.1-201ENST00000456962 1325 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 CKAP2P1-201ENST00000555477 2049 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RNU6-1309P-201ENST00000363305 108 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RNU6-619P-201ENST00000365146 108 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RNU6-171P-201ENST00000384354 107 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RPL5P18-201ENST00000406671 891 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 Y_RNA.605-201ENST00000410577 105 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RNU6-373P-201ENST00000411247 98 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AL139128.1-201ENST00000413921 941 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RAD23BP1-201ENST00000421404 1227 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 EIF4A1P7-201ENST00000421800 1220 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 MTCYBP8-201ENST00000422855 651 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 Z82205.1-201ENST00000428456 297 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC007559.1-201ENST00000428736 355 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC109583.1-201ENST00000432156 268 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 GTF2IP13-201ENST00000438487 386 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 PPIAP17-201ENST00000438507 471 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RPL5P25-201ENST00000441148 775 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC015983.1-201ENST00000441577 373 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 NDUFA5P7-201ENST00000452914 242 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 MTND1P12-201ENST00000455231 147 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RPL18AP17-201ENST00000455326 198 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC010307.1-201ENST00000467206 836 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 COPS8P2-201ENST00000473228 627 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RN7SL570P-201ENST00000484405 292 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 HMGB1P28-201ENST00000507778 552 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC017037.2-201ENST00000513850 890 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 BX510359.5-201ENST00000515651 304 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RNA5SP216-201ENST00000516111 123 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 IGLV2-28-201ENST00000520681 304 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 NRBF2P4-201ENST00000520874 850 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC018630.1-201ENST00000541376 925 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 MIR1269B-201ENST00000580405 75 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC016925.2-201ENST00000605108 242 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC100810.6-201ENST00000638068 285 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 AC091046.3-201ENST00000631455 1574 ntBASIC6□□□□□ -1.45
SHKBP1Q8TBC3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHKBP1Q8TBC3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHKBP1Q8TBC3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms