Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 DBF4P1-201ENST00000412976 1892 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RAD17P1-201ENST00000418130 2042 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RN7SKP185-201ENST00000362813 326 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 Y_RNA.77-201ENST00000362962 107 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 SNORA73.1-201ENST00000363107 205 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 Y_RNA.311-201ENST00000365068 96 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RNU6-1200P-201ENST00000384162 107 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 MIR217-201ENST00000384817 110 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RPS3AP26-201ENST00000398259 784 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 HSFY4P-201ENST00000415994 1181 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AL022400.1-201ENST00000423946 935 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 RPP40P1-201ENST00000426762 456 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 Z93242.1-201ENST00000427102 353 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC124944.2-201ENST00000429866 1242 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 HSFY6P-201ENST00000445573 403 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC092045.1-201ENST00000495716 1231 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC068993.1-201ENST00000546724 589 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC024909.2-201ENST00000553035 286 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 AL607023.1-201ENST00000620045 248 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 Z69908.1-201ENST00000622603 247 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 Z95331.1-201ENST00000623075 23112 ntBASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SMC1BQ8NDV3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AL606537.1-201ENST00000607258 2011 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AC025574.1-201ENST00000554784 1653 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RNU4-24P-201ENST00000364565 139 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RNU1-13P-201ENST00000384499 162 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 U3.30-201ENST00000391308 210 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 TPT1P2-201ENST00000413105 503 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AL050321.1-201ENST00000432363 400 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 COX6CP18-201ENST00000448769 222 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RPL7P1-201ENST00000468161 747 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RPL7P9-201ENST00000468715 747 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RNU6-678P-201ENST00000516832 109 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RNU1-45P-201ENST00000517191 141 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AP001189.2-201ENST00000527320 189 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AL031985.2-201ENST00000600955 480 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AC090948.1-201ENST00000607464 549 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AL023881.1-201ENST00000621088 301 ntBASIC5.82□□□□□ -1.48
SMC1BQ8NDV3 AC007494.3-201ENST00000624660 743 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms