Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 NEAT1-202ENST00000501122 22743 ntBASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NANOGP1Q8N7R0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 TLK1P1-201ENST00000456760 2440 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 OR52B1P-201ENST00000316506 909 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RN7SKP104-201ENST00000362605 328 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RNU5D-1-201ENST00000363299 116 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 SNORA70.10-201ENST00000384515 134 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RN7SKP240-201ENST00000410583 375 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RPS7P13-201ENST00000413955 498 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RPL23AP39-201ENST00000415533 405 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC114814.2-201ENST00000419195 485 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC093655.2-201ENST00000425735 631 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 FAM96AP1-201ENST00000430879 482 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 NPM1P39-201ENST00000449818 867 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RNA5SP269-201ENST00000459032 137 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RPL7P48-201ENST00000461513 746 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 NDUFA5P5-201ENST00000468361 342 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RPS4XP18-201ENST00000495480 763 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RN7SL612P-201ENST00000497704 295 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC134698.5-201ENST00000519444 336 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AP003392.2-201ENST00000527269 208 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC008083.2-201ENST00000546707 476 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 PSMB7P1-201ENST00000556349 514 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 TPRKBP2-201ENST00000565969 475 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AP005119.2-201ENST00000579735 1105 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 RN7SL176P-201ENST00000580352 264 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 COX6CP4-201ENST00000605798 228 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC091979.2-201ENST00000607514 214 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AL359091.2-201ENST00000609303 556 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC024941.1-201ENST00000612250 334 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC016769.4-201ENST00000616893 535 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC025048.6-202ENST00000627667 438 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 AC092435.4-201ENST00000623012 4159 ntBASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NANOGP1Q8N7R0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 AC004520.1-201ENST00000608362 1413 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 HMGB1P5-201ENST00000255320 642 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 Y_RNA.18-201ENST00000362461 102 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 RNY4P24-201ENST00000362735 96 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 RNU1-20P-201ENST00000363314 162 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 RNU6-374P-201ENST00000364146 108 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 RNU4-91P-201ENST00000364778 135 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 Y_RNA.390-201ENST00000383932 102 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 RNA5SP372-201ENST00000390836 115 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 AL161909.1-201ENST00000397390 712 ntBASIC4.38□□□□□ -1.71
NANOGP1Q8N7R0 MTND4LP20-201ENST00000402379 270 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms