Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL133383.2-201ENST00000622958 2336 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AP002088.1-201ENST00000382740 395 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 RNA5SP120-201ENST00000410900 112 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AC008264.1-201ENST00000447612 367 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 TRBV8-2-201ENST00000475637 270 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 RPS6P4-201ENST00000494693 758 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 UBE2NP1-201ENST00000545592 458 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AC079880.2-201ENST00000603790 1213 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 AL158196.1-201ENST00000616786 434 ntBASIC5.26□□□□□ -1.57
VPS8Q8N3P4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS8Q8N3P4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 LINC01355-201ENST00000566551 5444 ntBASIC5.25□□□□□ -1.57
VPS8Q8N3P4 Z83843.1-201ENST00000604070 3685 ntBASIC5.25□□□□□ -1.57
VPS8Q8N3P4 MIR491-201ENST00000384877 84 ntBASIC5.25□□□□□ -1.57
VPS8Q8N3P4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 BX842559.1-201ENST00000419615 532 ntBASIC5.25□□□□□ -1.57
VPS8Q8N3P4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 SCARNA20.6-201ENST00000517251 106 ntBASIC5.25□□□□□ -1.57
VPS8Q8N3P4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VPS8Q8N3P4 GCNT6-201ENST00000379591 934 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 HSPE1P27-201ENST00000430808 296 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AL353705.1-201ENST00000433468 480 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 MRPS31P2-201ENST00000451581 518 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 ARL2BPP6-201ENST00000512757 439 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 SNORA70.19-201ENST00000516717 90 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AC107934.2-201ENST00000518653 310 ntBASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VPS8Q8N3P4 AC017071.1-201ENST00000564407 2204 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC126124.2-201ENST00000413542 321 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 YPEL5P2-201ENST00000605553 359 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC000123.3-201ENST00000624029 4975 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AF117829.1-206ENST00000621883 3802 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS8Q8N3P4 MIR483-201ENST00000385070 76 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC104297.1-201ENST00000393779 870 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC091390.3-201ENST00000426478 338 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AL158071.1-201ENST00000430315 461 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC091862.1-201ENST00000438016 1100 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 BX510359.1-201ENST00000456973 237 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 AC021678.1-201ENST00000505195 936 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 PHBP14-201ENST00000512887 367 ntBASIC5.23□□□□□ -1.57
VPS8Q8N3P4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 LIPT1P1-201ENST00000415870 1186 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 OR1AA1P-201ENST00000419597 916 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS8Q8N3P4 CAB39P1-201ENST00000502277 460 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 APOOP4-201ENST00000513530 597 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 MIR2276-201ENST00000516886 89 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 MIR5004-201ENST00000579078 107 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 MIR5195-201ENST00000583555 115 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 AC012493.2-201ENST00000595083 291 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 AL606834.2-201ENST00000602954 668 ntBASIC5.22□□□□□ -1.57
VPS8Q8N3P4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS8Q8N3P4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
VPS8Q8N3P4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS8Q8N3P4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms