Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 SNORA66-201ENST00000384792 133 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC005522.1-201ENST00000395416 346 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL034403.1-201ENST00000399414 885 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 CYCSP45-201ENST00000402289 315 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 RPS25P9-201ENST00000435591 252 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 RPL7P36-201ENST00000444633 681 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL354714.3-201ENST00000447284 493 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 PNPLA4P1-201ENST00000458328 305 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 KLF3P2-201ENST00000465138 268 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 MTND6P6-201ENST00000478031 263 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC023424.2-201ENST00000493479 777 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC105252.1-201ENST00000503089 286 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VRK3Q8IV63 COX6B1P5-201ENST00000509843 249 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RNU6-1225P-201ENST00000516336 65 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RN7SKP66-201ENST00000516681 231 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RN7SKP260-201ENST00000516907 149 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 RN7SKP147-201ENST00000517154 244 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 GTF2IP22-201ENST00000554443 182 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 MIR4660-201ENST00000583549 74 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 AC018445.2-201ENST00000622987 260 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 MIR3688-2-201ENST00000636963 87 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 NAMPTP1-201ENST00000440465 2514 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 AL031595.2-201ENST00000624215 19071 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 RPS4XP5-202ENST00000449995 1334 ntBASIC4.92□□□□□ -1.62
VRK3Q8IV63 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VRK3Q8IV63 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL354685.2-201ENST00000448218 1447 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL022322.2-201ENST00000624072 20397 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL138820.1-201ENST00000617901 5305 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 RNA5SP507-201ENST00000363603 121 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 Y_RNA.302-201ENST00000364997 102 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 RNA5SP428-201ENST00000365129 132 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 RNU5A-6P-201ENST00000384136 116 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.91□□□□□ -1.62
VRK3Q8IV63 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VRK3Q8IV63 MTCYBP24-201ENST00000420387 1106 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.91□□□□□ -1.62
VRK3Q8IV63 HSPE1P16-201ENST00000426640 348 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms