Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 AL122126.1-201ENST00000546905 1318 ntBASIC4.93□□□□□ -1.62
CCDC38Q502W7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC38Q502W7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC38Q502W7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 RNU4-4P-201ENST00000364588 130 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 MIR195-201ENST00000385194 87 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 MIR765-201ENST00000390226 114 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 TAS2R15P-201ENST00000390674 928 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 RNA5SP345-201ENST00000410646 108 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 RNA5SP104-201ENST00000410989 118 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 DPPA2P3-201ENST00000411853 655 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC004987.3-201ENST00000413879 771 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC093162.1-201ENST00000419682 124 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 RPL21P134-201ENST00000453468 483 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC006967.1-201ENST00000467608 589 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 RPSAP50-201ENST00000481955 852 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 RN7SL558P-201ENST00000497468 299 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 OR51K1P-201ENST00000510214 950 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 RNU5A-4P-201ENST00000516588 111 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 C1GALT1P3-201ENST00000522049 819 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL049839.1-201ENST00000556151 657 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 TRAV15-201ENST00000556680 249 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC079075.1-201ENST00000559543 878 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC008536.1-201ENST00000602872 669 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 DUXAP3-201ENST00000603616 594 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC068722.2-201ENST00000618734 544 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 MIR6730-201ENST00000622213 67 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 AL353662.3-201ENST00000625131 237 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC38Q502W7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC38Q502W7 AC012020.1-201ENST00000624541 1728 ntBASIC4.92□□□□□ -1.62
CCDC38Q502W7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 RNA5SP507-201ENST00000363603 121 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 RNU6-83P-201ENST00000384568 112 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC069218.2-201ENST00000411665 344 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 RPL31P54-201ENST00000429803 370 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AL451139.1-201ENST00000434718 346 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 PTMAP6-201ENST00000439110 327 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 CEACAMP9-201ENST00000442990 513 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 NECAP1P2-201ENST00000455668 727 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AL139824.2-201ENST00000458731 1095 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 RPL23AP56-201ENST00000460778 453 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC010301.1-201ENST00000473936 355 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC087385.1-201ENST00000475062 312 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC109462.1-201ENST00000491087 368 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 WBP1LP4-201ENST00000505043 344 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 VWA8P1-201ENST00000510889 176 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC079395.1-201ENST00000510981 262 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC116353.3-201ENST00000511215 249 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC104057.1-201ENST00000515547 497 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms