Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC144BQ3MJ40 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL672167.1-204ENST00000641875 3017 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 RN7SKP224-201ENST00000364140 325 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 CYB5AP4-201ENST00000396692 399 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 RPL31P2-201ENST00000413849 377 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 EI24P4-201ENST00000423683 1078 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 SOCS5P3-201ENST00000425115 1576 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 ZYG11AP1-201ENST00000430329 837 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 SNRPEP7-201ENST00000438350 220 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL137845.2-201ENST00000444292 988 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 ARPC3P5-201ENST00000448802 534 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC092324.1-201ENST00000468671 324 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 MTCYBP43-201ENST00000513621 740 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC068446.3-201ENST00000555285 382 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC136618.2-201ENST00000575091 400 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AP005136.1-201ENST00000579765 429 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 KPNA2P3-201ENST00000584190 848 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC010857.1-201ENST00000606398 594 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC080013.4-201ENST00000607624 649 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AC092140.2-201ENST00000618027 521 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 AL603750.1-201ENST00000624216 1717 ntBASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC144BQ3MJ40 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 U3.3-201ENST00000362986 216 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 MT-TH-201ENST00000387441 69 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL078599.1-201ENST00000402075 293 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL024474.1-201ENST00000404655 591 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 NUDT19P3-201ENST00000404698 555 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 RNA5SP296-201ENST00000410523 111 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL807761.1-201ENST00000417622 171 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 NPM1P33-201ENST00000438918 872 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC026410.2-201ENST00000460281 156 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 RPL7P22-201ENST00000466005 733 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL671862.1-201ENST00000515851 349 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC012400.1-201ENST00000518452 381 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 HSPA8P13-201ENST00000523715 472 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC137768.1-201ENST00000549998 553 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC007566.2-201ENST00000603642 413 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 U6.101-201ENST00000637707 76 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 AL360270.2-201ENST00000562952 5985 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 GDI2P1-201ENST00000429312 1336 ntBASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CCDC144BQ3MJ40 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC144BQ3MJ40 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms