Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHROOM1Q2M3G4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 SNORA62.2-201ENST00000364672 152 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 ATP5F1P4-201ENST00000397288 746 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 SNORA3.3-201ENST00000408712 125 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 MTCO1P54-201ENST00000430139 712 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 ZFAND6P1-201ENST00000434138 605 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 MTCO3P43-201ENST00000440974 771 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AL133162.1-201ENST00000463228 453 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 MTCO1P31-201ENST00000506355 492 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC104619.4-201ENST00000510773 249 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AL355802.4-201ENST00000607635 548 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC005344.1-201ENST00000613391 459 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 RMST_9.1-201ENST00000619945 193 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AL357559.1-201ENST00000622228 274 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC020978.9-201ENST00000624380 1141 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AL356121.2-201ENST00000624715 780 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 AC116563.2-201ENST00000624751 535 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 ZNF962P-201ENST00000443465 3140 ntBASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHROOM1Q2M3G4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AL627171.1-201ENST00000618845 1308 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 GCNT6-201ENST00000379591 934 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 CCNB2P1-201ENST00000399411 1150 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 HMGN2P31-201ENST00000432430 273 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 RPL7P24-201ENST00000493052 752 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 RPS6P4-201ENST00000494693 758 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC012170.1-201ENST00000495139 359 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC016550.3-201ENST00000515706 767 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AP003072.4-201ENST00000624580 310 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AP004289.2-201ENST00000444413 1457 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC106871.1-201ENST00000568324 3102 ntBASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.53□□□□□ -1.68
SHROOM1Q2M3G4 AC009501.3-201ENST00000605001 1352 ntBASIC4.53□□□□□ -1.69
SHROOM1Q2M3G4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RNA5SP51-201ENST00000364750 119 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RNA5SP97-201ENST00000365006 84 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RNU6-883P-201ENST00000384597 107 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AL035423.1-201ENST00000420331 213 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 NDUFA5P10-201ENST00000432147 357 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AL031663.1-201ENST00000437445 219 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 AC245517.2-201ENST00000442890 346 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RPS17P13-201ENST00000448974 407 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 MTND2P25-201ENST00000449028 610 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 SNRPGP5-201ENST00000456003 220 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RN7SL585P-201ENST00000470538 280 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 RPL7P49-201ENST00000471402 708 ntBASIC4.52□□□□□ -1.69
SHROOM1Q2M3G4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms