Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.35□□□□□ -1.71
LTBQ06643 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.35□□□□□ -1.71
LTBQ06643 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.35□□□□□ -1.71
LTBQ06643 ACTR3BP3-201ENST00000565577 979 ntBASIC4.35□□□□□ -1.71
LTBQ06643 MIR4277-201ENST00000578298 84 ntBASIC4.35□□□□□ -1.71
LTBQ06643 AC233702.9-201ENST00000581528 203 ntBASIC4.35□□□□□ -1.71
LTBQ06643 MIR4999-201ENST00000585029 91 ntBASIC4.35□□□□□ -1.71
LTBQ06643 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.35□□□□□ -1.71
LTBQ06643 AL121932.1-201ENST00000605542 214 ntBASIC4.35□□□□□ -1.71
LTBQ06643 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.35□□□□□ -1.71
LTBQ06643 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.35□□□□□ -1.71
LTBQ06643 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.35□□□□□ -1.71
LTBQ06643 OR5BE1P-202ENST00000641168 1176 ntBASIC4.35□□□□□ -1.71
LTBQ06643 AC027228.2-201ENST00000567141 2154 ntBASIC4.35□□□□□ -1.71
LTBQ06643 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.35□□□□□ -1.71
LTBQ06643 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LTBQ06643 AL356473.1-201ENST00000406203 1408 ntBASIC4.35□□□□□ -1.71
LTBQ06643 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.35□□□□□ -1.71
LTBQ06643 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LTBQ06643 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.35□□□□□ -1.71
LTBQ06643 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 DHX9P1-201ENST00000436565 3076 ntBASIC4.34□□□□□ -1.71
LTBQ06643 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LTBQ06643 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 SNORA57.1-201ENST00000391227 145 ntBASIC4.34□□□□□ -1.71
LTBQ06643 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 RPS3AP23-201ENST00000401762 784 ntBASIC4.34□□□□□ -1.71
LTBQ06643 ARL4AP5-201ENST00000404372 599 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
LTBQ06643 VTA1P1-201ENST00000414044 866 ntBASIC4.34□□□□□ -1.71
LTBQ06643 MTCO3P41-201ENST00000414801 328 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.34□□□□□ -1.71
LTBQ06643 AL451139.1-201ENST00000434718 346 ntBASIC4.34□□□□□ -1.71
LTBQ06643 NMNAT1P2-201ENST00000435192 860 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 AC004938.1-201ENST00000438468 308 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AL354941.1-201ENST00000438600 464 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 MTCYBP3-201ENST00000445588 1137 ntBASIC4.34□□□□□ -1.71
LTBQ06643 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.34□□□□□ -1.71
LTBQ06643 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC022034.3-201ENST00000471393 478 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC104689.1-201ENST00000473356 768 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC104971.1-201ENST00000495117 578 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC111000.3-201ENST00000508057 576 ntBASIC4.34□□□□□ -1.71
LTBQ06643 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 RN7SKP92-201ENST00000517266 244 ntBASIC4.34□□□□□ -1.71
LTBQ06643 IGKV1-32-201ENST00000519290 311 ntBASIC4.34□□□□□ -1.71
LTBQ06643 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.34□□□□□ -1.71
LTBQ06643 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.34□□□□□ -1.71
LTBQ06643 HIGD1AP17-201ENST00000554576 276 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.34□□□□□ -1.71
LTBQ06643 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.34□□□□□ -1.71
LTBQ06643 AL031985.2-201ENST00000600955 480 ntBASIC4.34□□□□□ -1.71
LTBQ06643 DUXAP11-201ENST00000603858 526 ntBASIC4.34□□□□□ -1.71
LTBQ06643 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC096553.1-201ENST00000605169 829 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AL391358.1-201ENST00000605342 190 ntBASIC4.34□□□□□ -1.71
LTBQ06643 SNORD91B-202ENST00000608459 222 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AP000254.1-201ENST00000609934 520 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AC090246.1-201ENST00000616499 426 ntBASIC4.34□□□□□ -1.71
LTBQ06643 AF246928.1-201ENST00000623768 87 ntBASIC4.34□□□□□ -1.71
LTBQ06643 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
LTBQ06643 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.34□□□□□ -1.71
LTBQ06643 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LTBQ06643 SOCS5P3-201ENST00000425115 1576 ntBASIC4.34□□□□□ -1.71
LTBQ06643 CR381670.1-201ENST00000624291 1693 ntBASIC4.34□□□□□ -1.71
LTBQ06643 ASNSP1-204ENST00000641977 1664 ntBASIC4.34□□□□□ -1.71
LTBQ06643 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LTBQ06643 AC138393.1-206ENST00000540997 1886 ntBASIC4.34□□□□□ -1.71
LTBQ06643 TLK1P1-201ENST00000456760 2440 ntBASIC4.34□□□□□ -1.72
LTBQ06643 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
LTBQ06643 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LTBQ06643 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
LTBQ06643 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LTBQ06643 AP000776.1-201ENST00000530032 1663 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms