Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL159987.2-201ENST00000432754 307 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN6P56747 Z74696.2-201ENST00000436514 498 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN6P56747 CYCSP32-201ENST00000440548 321 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 HSPD1P15-201ENST00000505573 1122 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 HMGN1P11-201ENST00000508668 303 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN6P56747 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN6P56747 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN6P56747 MTND1P6-201ENST00000523621 946 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN6P56747 AL049634.3-201ENST00000604968 457 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN6P56747 MIR7975-201ENST00000619350 68 ntBASIC3.75□□□□□ -1.81
CLDN6P56747 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN6P56747 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN6P56747 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CLDN6P56747 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN6P56747 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN6P56747 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN6P56747 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN6P56747 RNA5SP72-201ENST00000364442 117 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 OR4K6P-201ENST00000416478 897 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 ELOCP18-201ENST00000434209 337 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 RPL23AP89-201ENST00000439324 255 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 Z99127.2-201ENST00000441426 334 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 RANP8-201ENST00000444720 713 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 RPL7P48-201ENST00000461513 746 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AL133162.1-201ENST00000463228 453 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 SETP6-201ENST00000479329 568 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AC106707.2-201ENST00000484182 374 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC009268.1-201ENST00000561352 1203 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 MIR5195-201ENST00000583555 115 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN6P56747 AL139395.1-201ENST00000603662 160 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AC010680.3-201ENST00000604215 520 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AC090525.3-201ENST00000605601 189 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC055764.2-201ENST00000610089 670 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 AC138907.10-201ENST00000623708 983 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AP003072.4-201ENST00000624580 310 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN6P56747 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 AF001550.2-201ENST00000636643 217 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN6P56747 MTND5P1-201ENST00000445440 1375 ntBASIC3.74□□□□□ -1.81
CLDN6P56747 AC068254.2-201ENST00000623938 3577 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 AC093311.1-201ENST00000506586 2021 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLDN6P56747 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN6P56747 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN6P56747 RNU6-819P-201ENST00000364116 107 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 RNA5SP51-201ENST00000364750 119 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN6P56747 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLDN6P56747 NDUFB4P4-201ENST00000404822 243 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 MTND4P11-201ENST00000417020 1058 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.73□□□□□ -1.81
CLDN6P56747 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN6P56747 CYCSP35-201ENST00000451978 304 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN6P56747 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN6P56747 HNRNPKP5-201ENST00000515300 253 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 AC087369.1-201ENST00000520775 996 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 UBTFL9-201ENST00000534504 1148 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN6P56747 AC079171.1-201ENST00000568788 914 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 AC005000.2-201ENST00000605468 310 ntBASIC3.73□□□□□ -1.81
CLDN6P56747 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN6P56747 AC011472.4-201ENST00000615848 491 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms