Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 AL352979.3-201ENST00000553515 247 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH13P55290 MTCYBP23-201ENST00000558717 1102 ntBASIC4.25□□□□□ -1.73
CDH13P55290 CYP4A43P-201ENST00000568156 121 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH13P55290 MIR4270-201ENST00000581799 70 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC069061.3-201ENST00000582254 823 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 AL160237.3-201ENST00000604114 1013 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL390816.3-201ENST00000604527 1066 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL138478.1-201ENST00000612252 832 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC010975.3-201ENST00000618727 978 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL157770.1-201ENST00000623049 439 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AP000843.1-201ENST00000624880 701 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 FP325313.1-201ENST00000638228 703 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH13P55290 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
CDH13P55290 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
CDH13P55290 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 AC008033.1-201ENST00000216407 1162 ntBASIC4.24□□□□□ -1.73
CDH13P55290 HMGB1P5-201ENST00000255320 642 ntBASIC4.24□□□□□ -1.73
CDH13P55290 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH13P55290 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH13P55290 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 MIR550A3-201ENST00000390735 95 ntBASIC4.24□□□□□ -1.73
CDH13P55290 FABP12P1-201ENST00000401911 322 ntBASIC4.24□□□□□ -1.73
CDH13P55290 RNU2-21P-201ENST00000410368 188 ntBASIC4.24□□□□□ -1.73
CDH13P55290 NUP35P2-201ENST00000416748 943 ntBASIC4.24□□□□□ -1.73
CDH13P55290 UQCRBP1-201ENST00000421129 336 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.24□□□□□ -1.73
CDH13P55290 NPM1P34-201ENST00000428821 893 ntBASIC4.24□□□□□ -1.73
CDH13P55290 CNOT7P1-201ENST00000429006 852 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AL359265.2-201ENST00000434367 631 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 PPIAP17-201ENST00000438507 471 ntBASIC4.24□□□□□ -1.73
CDH13P55290 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 AL353748.1-201ENST00000440753 474 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC114495.1-201ENST00000441274 436 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.24□□□□□ -1.73
CDH13P55290 RPL7P59-201ENST00000447700 943 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
CDH13P55290 Z99714.1-201ENST00000450463 807 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 AC053481.1-201ENST00000467217 306 ntBASIC4.24□□□□□ -1.73
CDH13P55290 RPL21P126-201ENST00000470049 478 ntBASIC4.24□□□□□ -1.73
CDH13P55290 RN7SL826P-201ENST00000479724 288 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.24□□□□□ -1.73
CDH13P55290 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 AC113420.1-201ENST00000507903 571 ntBASIC4.24□□□□□ -1.73
CDH13P55290 RNU6-202P-201ENST00000515998 96 ntBASIC4.24□□□□□ -1.73
CDH13P55290 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 IGKV1-32-201ENST00000519290 311 ntBASIC4.24□□□□□ -1.73
CDH13P55290 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 AP000827.1-201ENST00000527814 258 ntBASIC4.24□□□□□ -1.73
CDH13P55290 OR5BC1P-201ENST00000529327 739 ntBASIC4.24□□□□□ -1.73
CDH13P55290 MIR4480-201ENST00000582492 71 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH13P55290 AP001160.4-201ENST00000596971 382 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AC027449.1-201ENST00000608890 407 ntBASIC4.24□□□□□ -1.73
CDH13P55290 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
CDH13P55290 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH13P55290 AC000123.2-201ENST00000623124 461 ntBASIC4.24□□□□□ -1.73
CDH13P55290 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH13P55290 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH13P55290 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CDH13P55290 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH13P55290 AC016588.2-201ENST00000632484 3021 ntBASIC4.23□□□□□ -1.73
CDH13P55290 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH13P55290 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH13P55290 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH13P55290 RNU6-839P-201ENST00000363347 108 ntBASIC4.23□□□□□ -1.73
CDH13P55290 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH13P55290 RNU6-444P-201ENST00000383988 108 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms