Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 Y_RNA.218-201ENST00000364218 104 ntBASIC7.9□□□□□ -1.14
ATN1P54259 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
ATN1P54259 RNU6-1056P-201ENST00000383996 107 ntBASIC7.9□□□□□ -1.14
ATN1P54259 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.9□□□□□ -1.14
ATN1P54259 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.9□□□□□ -1.14
ATN1P54259 AC007365.2-201ENST00000428806 458 ntBASIC7.9□□□□□ -1.14
ATN1P54259 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.9□□□□□ -1.14
ATN1P54259 RPL37P1-201ENST00000432310 284 ntBASIC7.9□□□□□ -1.14
ATN1P54259 AL445928.1-201ENST00000435545 222 ntBASIC7.9□□□□□ -1.14
ATN1P54259 RPL23AP71-201ENST00000470966 469 ntBASIC7.9□□□□□ -1.14
ATN1P54259 AL161747.1-201ENST00000480068 358 ntBASIC7.9□□□□□ -1.14
ATN1P54259 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.9□□□□□ -1.14
ATN1P54259 AC108120.1-201ENST00000506543 991 ntBASIC7.9□□□□□ -1.14
ATN1P54259 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.9□□□□□ -1.14
ATN1P54259 RNU2-69P-201ENST00000516061 100 ntBASIC7.9□□□□□ -1.14
ATN1P54259 RNU6-685P-201ENST00000517088 95 ntBASIC7.9□□□□□ -1.14
ATN1P54259 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.9□□□□□ -1.14
ATN1P54259 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.9□□□□□ -1.14
ATN1P54259 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.9□□□□□ -1.14
ATN1P54259 ELOCP5-201ENST00000604924 333 ntBASIC7.9□□□□□ -1.14
ATN1P54259 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.9□□□□□ -1.14
ATN1P54259 TUG1_4.1-201ENST00000619464 181 ntBASIC7.9□□□□□ -1.14
ATN1P54259 AC089999.3-201ENST00000622440 577 ntBASIC7.9□□□□□ -1.14
ATN1P54259 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.9□□□□□ -1.14
ATN1P54259 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
ATN1P54259 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
ATN1P54259 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.9□□□□□ -1.14
ATN1P54259 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
ATN1P54259 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.9□□□□□ -1.15
ATN1P54259 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
ATN1P54259 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.9□□□□□ -1.15
ATN1P54259 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
ATN1P54259 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.9□□□□□ -1.15
ATN1P54259 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
ATN1P54259 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
ATN1P54259 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.89□□□□□ -1.15
ATN1P54259 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 RLIMP1-201ENST00000339626 1680 ntBASIC7.89□□□□□ -1.15
ATN1P54259 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 AC104964.2-201ENST00000562242 4641 ntBASIC7.89□□□□□ -1.15
ATN1P54259 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 AC010894.1-201ENST00000313760 361 ntBASIC7.89□□□□□ -1.15
ATN1P54259 RNU6-80P-201ENST00000384195 107 ntBASIC7.89□□□□□ -1.15
ATN1P54259 RNU5E-9P-201ENST00000411164 104 ntBASIC7.89□□□□□ -1.15
ATN1P54259 AC007098.1-201ENST00000420122 367 ntBASIC7.89□□□□□ -1.15
ATN1P54259 AC239367.3-201ENST00000428996 814 ntBASIC7.89□□□□□ -1.15
ATN1P54259 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.89□□□□□ -1.15
ATN1P54259 RN7SL390P-201ENST00000470634 284 ntBASIC7.89□□□□□ -1.15
ATN1P54259 RPL30P10-201ENST00000488148 337 ntBASIC7.89□□□□□ -1.15
ATN1P54259 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC7.89□□□□□ -1.15
ATN1P54259 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.89□□□□□ -1.15
ATN1P54259 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.89□□□□□ -1.15
ATN1P54259 TOMM20P1-201ENST00000534518 427 ntBASIC7.89□□□□□ -1.15
ATN1P54259 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.89□□□□□ -1.15
ATN1P54259 AC007068.2-201ENST00000543168 395 ntBASIC7.89□□□□□ -1.15
ATN1P54259 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.89□□□□□ -1.15
ATN1P54259 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.89□□□□□ -1.15
ATN1P54259 COX6CP3-201ENST00000580869 223 ntBASIC7.89□□□□□ -1.15
ATN1P54259 SNX29P2-204ENST00000603801 875 ntBASIC7.89□□□□□ -1.15
ATN1P54259 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
ATN1P54259 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC7.89□□□□□ -1.15
ATN1P54259 AC007785.2-201ENST00000598627 1916 ntBASIC7.89□□□□□ -1.15
ATN1P54259 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
ATN1P54259 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ATN1P54259 AP001148.1-201ENST00000624124 2359 ntBASIC7.89□□□□□ -1.15
ATN1P54259 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.89□□□□□ -1.15
ATN1P54259 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ATN1P54259 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
ATN1P54259 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ATN1P54259 AL138713.1-201ENST00000624026 2130 ntBASIC7.88□□□□□ -1.15
ATN1P54259 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.88□□□□□ -1.15
ATN1P54259 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.88□□□□□ -1.15
ATN1P54259 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
ATN1P54259 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
ATN1P54259 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ATN1P54259 RNU6-97P-201ENST00000363387 104 ntBASIC7.88□□□□□ -1.15
ATN1P54259 RNA5SP85-201ENST00000365378 119 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms