Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF4P48230 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TM4SF4P48230 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.22□□□□□ -1.57
TM4SF4P48230 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TM4SF4P48230 AC093535.2-201ENST00000624769 2326 ntBASIC5.22□□□□□ -1.57
TM4SF4P48230 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.21□□□□□ -1.57
TM4SF4P48230 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
TM4SF4P48230 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.21□□□□□ -1.57
TM4SF4P48230 AP005435.3-201ENST00000531260 3198 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TM4SF4P48230 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 FAM133CP-201ENST00000332869 704 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC019155.1-201ENST00000382242 574 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 MIR200C-201ENST00000384980 68 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.21□□□□□ -1.58
TM4SF4P48230 ARL4AP5-201ENST00000404372 599 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 H3F3BP1-201ENST00000440551 403 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.21□□□□□ -1.58
TM4SF4P48230 GEMIN8P3-201ENST00000445417 720 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.21□□□□□ -1.58
TM4SF4P48230 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 RPS27AP13-201ENST00000498403 237 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 MTCYBP16-201ENST00000509187 1129 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 FABP5P12-201ENST00000515543 389 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 ARL2BPP5-201ENST00000523141 481 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 OR5BC1P-201ENST00000529327 739 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.21□□□□□ -1.58
TM4SF4P48230 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC068313.1-201ENST00000604028 1008 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 ELOCP35-201ENST00000604289 336 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC107952.2-201ENST00000606048 486 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.21□□□□□ -1.58
TM4SF4P48230 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 MIR6875-201ENST00000617506 72 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AC244100.1-202ENST00000621554 382 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 AL158163.1-201ENST00000603915 1649 ntBASIC5.21□□□□□ -1.58
TM4SF4P48230 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TM4SF4P48230 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TM4SF4P48230 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TM4SF4P48230 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TM4SF4P48230 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TM4SF4P48230 SNORD116-23-201ENST00000384645 92 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 MIR449B-201ENST00000384995 97 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 MTCO3P31-201ENST00000405526 789 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 RPL23AP47-201ENST00000408017 460 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 RNU6ATAC-201ENST00000408749 126 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AL139095.3-201ENST00000419672 1203 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 OR6C64P-201ENST00000419708 825 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 MTCO3P1-205ENST00000422088 832 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AL050321.1-201ENST00000432363 400 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 RPL23AP76-201ENST00000441860 458 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 RPS26P56-201ENST00000444468 240 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AL162151.2-201ENST00000448875 158 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 ANKRD26P4-201ENST00000455755 950 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC068587.2-201ENST00000478386 781 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.2□□□□□ -1.58
TM4SF4P48230 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AC110792.2-201ENST00000510278 224 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC008958.1-201ENST00000511047 682 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 AC006499.6-201ENST00000511169 607 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC109445.1-201ENST00000512356 383 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.2□□□□□ -1.58
TM4SF4P48230 RNU6-1225P-201ENST00000516336 65 ntBASIC5.2□□□□□ -1.58
TM4SF4P48230 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.2□□□□□ -1.58
TM4SF4P48230 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms