Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR7153-201ENST00000637758 57 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.11□□□□□ -1.75
CASQ1P31415 AL672296.1-201ENST00000427780 2158 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CASQ1P31415 MTCO1P11-201ENST00000429111 1528 ntBASIC4.11□□□□□ -1.75
CASQ1P31415 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 AC026951.1-201ENST00000559530 2459 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 RNA5SP435-201ENST00000364044 108 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 RNU6-283P-201ENST00000364788 107 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 MIR129-1-201ENST00000384972 72 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 RPL23AP47-201ENST00000408017 460 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 LIPT1P1-201ENST00000415870 1186 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC234782.4-201ENST00000417646 1048 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.1□□□□□ -1.75
CASQ1P31415 RPL23AP1-201ENST00000428990 471 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 RPS11P1-201ENST00000451072 473 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 PTGES3P5-201ENST00000455109 434 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC096992.1-201ENST00000459808 709 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 VN1R17P-201ENST00000472048 1090 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC093267.1-201ENST00000489176 961 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CASQ1P31415 RN7SKP60-201ENST00000516985 239 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.1□□□□□ -1.75
CASQ1P31415 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.1□□□□□ -1.75
CASQ1P31415 OR5AP1P-201ENST00000529730 940 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.1□□□□□ -1.75
CASQ1P31415 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 AC091516.1-201ENST00000549191 703 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC090616.5-202ENST00000582111 297 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.1□□□□□ -1.75
CASQ1P31415 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.1□□□□□ -1.75
CASQ1P31415 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
CASQ1P31415 AC099778.2-201ENST00000610904 211 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 MIR6868-201ENST00000611215 58 ntBASIC4.1□□□□□ -1.75
CASQ1P31415 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.1□□□□□ -1.75
CASQ1P31415 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CASQ1P31415 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASQ1P31415 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.09□□□□□ -1.75
CASQ1P31415 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASQ1P31415 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CASQ1P31415 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CASQ1P31415 CRYBB2P1-203ENST00000415709 538 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.09□□□□□ -1.75
CASQ1P31415 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.09□□□□□ -1.75
CASQ1P31415 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.09□□□□□ -1.75
CASQ1P31415 AL590103.1-201ENST00000434488 307 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 MTCO3P17-201ENST00000443775 513 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 RPL7P61-201ENST00000451721 751 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 OR7L1P-201ENST00000456181 380 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.09□□□□□ -1.75
CASQ1P31415 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.09□□□□□ -1.75
CASQ1P31415 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.09□□□□□ -1.75
CASQ1P31415 IGKV2-36-201ENST00000519999 223 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AC087369.1-201ENST00000520775 996 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AL139174.1-201ENST00000531489 886 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.09□□□□□ -1.75
CASQ1P31415 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.09□□□□□ -1.75
CASQ1P31415 SNORA51-201ENST00000606420 132 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AC006023.2-201ENST00000609916 167 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 AC016769.4-201ENST00000616893 535 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 SNORA50A-202ENST00000629536 136 ntBASIC4.09□□□□□ -1.75
CASQ1P31415 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CASQ1P31415 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CASQ1P31415 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
CASQ1P31415 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CASQ1P31415 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CASQ1P31415 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CASQ1P31415 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CASQ1P31415 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CASQ1P31415 AL161909.1-201ENST00000397390 712 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CASQ1P31415 SNORA11.3-201ENST00000408471 128 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.08□□□□□ -1.76
CASQ1P31415 HIGD1AP12-201ENST00000427832 281 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 PSMA2P3-201ENST00000429685 675 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 AC007563.3-201ENST00000433233 371 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 BTF3P10-201ENST00000433415 495 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 VN1R54P-201ENST00000435210 1049 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
CASQ1P31415 AL138878.2-201ENST00000440581 1241 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 HMGN2P16-201ENST00000456802 261 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 RPL21P104-201ENST00000464143 478 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CASQ1P31415 RPS3AP50-201ENST00000487064 803 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 KATNBL1P4-201ENST00000503545 918 ntBASIC4.08□□□□□ -1.76
CASQ1P31415 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms