Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.44□□□□□ -1.86
COL5A1P20908 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 YPEL5P2-201ENST00000605553 359 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.44□□□□□ -1.86
COL5A1P20908 AC233309.1-201ENST00000619522 751 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 U4.6-201ENST00000621618 127 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 AC090337.1-201ENST00000579651 2074 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.44□□□□□ -1.86
COL5A1P20908 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL5A1P20908 RNA5SP374-201ENST00000362939 125 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 RN7SKP53-201ENST00000411337 315 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.44□□□□□ -1.86
COL5A1P20908 AC002075.2-201ENST00000425207 252 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 AC008065.1-201ENST00000428525 348 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 AC099560.2-201ENST00000457554 255 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 MTND6P32-201ENST00000457611 483 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 FTH1P24-201ENST00000503502 462 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.44□□□□□ -1.86
COL5A1P20908 AC011611.1-201ENST00000552179 197 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 AC022149.2-201ENST00000621061 203 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 AC018555.1-201ENST00000567548 1980 ntBASIC3.44□□□□□ -1.86
COL5A1P20908 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
COL5A1P20908 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL5A1P20908 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
COL5A1P20908 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
COL5A1P20908 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 AC093535.2-201ENST00000624769 2326 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.43□□□□□ -1.86
COL5A1P20908 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
COL5A1P20908 RNA5SP197-201ENST00000363357 119 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AC093719.1-202ENST00000392735 373 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.43□□□□□ -1.86
COL5A1P20908 RPF2P1-201ENST00000424137 906 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 OSTCP5-201ENST00000425293 453 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 RPL23AP82-202ENST00000427528 469 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 HIGD1AP12-201ENST00000427832 281 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AL160175.1-201ENST00000428124 247 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AC025750.2-201ENST00000442609 450 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.43□□□□□ -1.86
COL5A1P20908 NPM1P39-201ENST00000449818 867 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 CENPBD1P1-201ENST00000464061 469 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.43□□□□□ -1.86
COL5A1P20908 HMGB3P13-201ENST00000511263 607 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 RPL7L1P13-201ENST00000511702 739 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 PHBP14-201ENST00000512887 367 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AP006245.1-201ENST00000522549 120 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.43□□□□□ -1.86
COL5A1P20908 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.43□□□□□ -1.86
COL5A1P20908 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.43□□□□□ -1.86
COL5A1P20908 CKS1BP3-201ENST00000600888 237 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 AC013412.1-201ENST00000610687 192 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL5A1P20908 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.43□□□□□ -1.86
COL5A1P20908 AL133383.2-201ENST00000622958 2336 ntBASIC3.43□□□□□ -1.86
COL5A1P20908 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL5A1P20908 TAF9BP1-201ENST00000396646 746 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 U3.39-201ENST00000408569 239 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.42□□□□□ -1.86
COL5A1P20908 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.42□□□□□ -1.86
COL5A1P20908 AL356535.1-201ENST00000440335 398 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL5A1P20908 RNU6-579P-201ENST00000516879 102 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
COL5A1P20908 NCAPGP2-201ENST00000557911 754 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
COL5A1P20908 AC068790.5-201ENST00000602741 355 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AL163642.2-201ENST00000604722 1019 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL5A1P20908 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL5A1P20908 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL5A1P20908 AC015813.6-201ENST00000624409 5808 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 RNU4-44P-201ENST00000363050 141 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 RNU1-18P-201ENST00000363062 164 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 SNORA38.1-201ENST00000364172 131 ntBASIC3.42□□□□□ -1.86
COL5A1P20908 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.42□□□□□ -1.86
COL5A1P20908 AC109925.1-201ENST00000478069 331 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms