Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PDGFRAP16234 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFRAP16234 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AL161909.1-201ENST00000397390 712 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 RPL23AP38-201ENST00000423801 469 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AC002542.1-201ENST00000440683 193 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 RPS26P30-201ENST00000443431 335 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 HMGB1P48-201ENST00000446155 598 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AC126121.1-201ENST00000482313 553 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 HPRT1P2-201ENST00000505250 544 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 PRELID3BP4-201ENST00000515476 571 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 RN7SKP82-201ENST00000516786 223 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 HMGB1P1-201ENST00000522557 636 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AC063950.1-201ENST00000552036 308 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC023824.3-201ENST00000569003 562 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFRAP16234 AP000919.1-202ENST00000581139 1264 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PDGFRAP16234 DNAJC19P3-201ENST00000594491 331 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AL161729.3-201ENST00000603533 673 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC115621.1-201ENST00000604653 858 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC064801.1-201ENST00000612025 407 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC078899.5-201ENST00000612475 178 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 AC026368.1-201ENST00000614934 690 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 MIR7702-201ENST00000621931 59 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.4□□□□□ -1.71
PDGFRAP16234 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.4□□□□□ -1.71
PDGFRAP16234 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PDGFRAP16234 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
PDGFRAP16234 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PDGFRAP16234 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFRAP16234 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.4□□□□□ -1.71
PDGFRAP16234 NOL8P1-201ENST00000508336 3529 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 RNA5SP391-201ENST00000363456 119 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 RNU6-77P-201ENST00000410554 91 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AC013262.1-201ENST00000426710 252 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 RPL23AP46-201ENST00000438548 490 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 AL929288.2-201ENST00000446368 407 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 OR51B8P-201ENST00000449892 769 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 RPL21P71-201ENST00000465598 459 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFRAP16234 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFRAP16234 OR5H4P-201ENST00000510851 923 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 AC090281.1-201ENST00000523019 276 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 AP003730.1-201ENST00000524605 285 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AC068339.2-201ENST00000534395 618 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFRAP16234 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AC124068.1-201ENST00000563131 678 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.39□□□□□ -1.71
PDGFRAP16234 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.39□□□□□ -1.71
PDGFRAP16234 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 MTCO1P14-201ENST00000441695 1559 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFRAP16234 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 LARP1BP1-201ENST00000506036 1359 ntBASIC4.39□□□□□ -1.71
PDGFRAP16234 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFRAP16234 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFRAP16234 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms