Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC130472.1-201ENST00000427885 309 ntBASIC8.09□□□□□ -1.11
CD44P16070 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 AC093106.2-201ENST00000428212 385 ntBASIC8.09□□□□□ -1.11
CD44P16070 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 MTATP6P7-201ENST00000453315 681 ntBASIC8.09□□□□□ -1.11
CD44P16070 SNORD2.1-201ENST00000458762 69 ntBASIC8.09□□□□□ -1.11
CD44P16070 AC091180.1-201ENST00000462104 372 ntBASIC8.09□□□□□ -1.11
CD44P16070 AC132942.1-201ENST00000486753 483 ntBASIC8.09□□□□□ -1.11
CD44P16070 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 AC015801.1-201ENST00000585651 153 ntBASIC8.09□□□□□ -1.11
CD44P16070 AC108451.2-201ENST00000603875 538 ntBASIC8.09□□□□□ -1.11
CD44P16070 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 AC015726.2-201ENST00000620112 122 ntBASIC8.09□□□□□ -1.11
CD44P16070 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.09□□□□□ -1.11
CD44P16070 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CD44P16070 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.09□□□□□ -1.11
CD44P16070 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
CD44P16070 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CD44P16070 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.08□□□□□ -1.12
CD44P16070 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CD44P16070 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CD44P16070 AL133384.1-201ENST00000412744 351 ntBASIC8.08□□□□□ -1.12
CD44P16070 AC079809.1-201ENST00000415468 276 ntBASIC8.08□□□□□ -1.12
CD44P16070 MTCO1P44-201ENST00000441935 243 ntBASIC8.08□□□□□ -1.12
CD44P16070 AL596266.1-201ENST00000448132 400 ntBASIC8.08□□□□□ -1.12
CD44P16070 RPL21P103-201ENST00000479921 488 ntBASIC8.08□□□□□ -1.12
CD44P16070 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.08□□□□□ -1.12
CD44P16070 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.08□□□□□ -1.12
CD44P16070 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 RAC1P5-201ENST00000512182 576 ntBASIC8.08□□□□□ -1.12
CD44P16070 RNU6-488P-201ENST00000515918 99 ntBASIC8.08□□□□□ -1.12
CD44P16070 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC8.08□□□□□ -1.12
CD44P16070 AP005660.1-201ENST00000522972 293 ntBASIC8.08□□□□□ -1.12
CD44P16070 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 RN7SL835P-201ENST00000579920 262 ntBASIC8.08□□□□□ -1.12
CD44P16070 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC8.08□□□□□ -1.12
CD44P16070 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC8.08□□□□□ -1.12
CD44P16070 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 uc_338.21-201ENST00000622458 147 ntBASIC8.08□□□□□ -1.12
CD44P16070 FP236240.3-201ENST00000623061 327 ntBASIC8.08□□□□□ -1.12
CD44P16070 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC8.08□□□□□ -1.12
CD44P16070 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 AC009831.5-201ENST00000624000 3189 ntBASIC8.08□□□□□ -1.12
CD44P16070 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CD44P16070 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.08□□□□□ -1.12
CD44P16070 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CD44P16070 AL157713.1-201ENST00000379752 1531 ntBASIC8.08□□□□□ -1.12
CD44P16070 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
CD44P16070 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 MAPK10-365ENST00000641902 3825 ntBASIC8.07□□□□□ -1.12
CD44P16070 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
CD44P16070 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.07□□□□□ -1.12
CD44P16070 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CD44P16070 Y_RNA.388-201ENST00000383919 113 ntBASIC8.07□□□□□ -1.12
CD44P16070 RNY3P4-201ENST00000384428 101 ntBASIC8.07□□□□□ -1.12
CD44P16070 MIR320B1-201ENST00000390209 79 ntBASIC8.07□□□□□ -1.12
CD44P16070 RNA5SP297-201ENST00000391029 113 ntBASIC8.07□□□□□ -1.12
CD44P16070 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.07□□□□□ -1.12
CD44P16070 AC113608.1-201ENST00000398740 305 ntBASIC8.07□□□□□ -1.12
CD44P16070 AL591034.2-201ENST00000402839 359 ntBASIC8.07□□□□□ -1.12
CD44P16070 SUMO2P13-201ENST00000403109 272 ntBASIC8.07□□□□□ -1.12
CD44P16070 FTOP1-201ENST00000419363 861 ntBASIC8.07□□□□□ -1.12
CD44P16070 OOSP1P1-201ENST00000423265 274 ntBASIC8.07□□□□□ -1.12
CD44P16070 AC104698.1-201ENST00000435671 276 ntBASIC8.07□□□□□ -1.12
CD44P16070 RPL12P18-201ENST00000437175 325 ntBASIC8.07□□□□□ -1.12
CD44P16070 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.07□□□□□ -1.12
CD44P16070 SNORD97-201ENST00000459187 142 ntBASIC8.07□□□□□ -1.12
CD44P16070 RN7SL325P-201ENST00000460434 283 ntBASIC8.07□□□□□ -1.12
CD44P16070 COPS8P2-201ENST00000473228 627 ntBASIC8.07□□□□□ -1.12
CD44P16070 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC8.07□□□□□ -1.12
CD44P16070 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.07□□□□□ -1.12
CD44P16070 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms