Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A1P02462 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A1P02462 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A1P02462 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
COL4A1P02462 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A1P02462 ZNF807-201ENST00000328088 1707 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A1P02462 S100A11P2-201ENST00000467589 312 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A1P02462 AC008885.1-201ENST00000514930 301 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A1P02462 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A1P02462 AC006946.3-201ENST00000609791 756 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 AC244517.3-201ENST00000616254 1235 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A1P02462 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A1P02462 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A1P02462 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.07□□□□□ -1.76
COL4A1P02462 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A1P02462 AC007529.1-201ENST00000418574 2178 ntBASIC4.07□□□□□ -1.76
COL4A1P02462 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A1P02462 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 RNA5SP235-201ENST00000365411 114 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A1P02462 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A1P02462 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A1P02462 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.06□□□□□ -1.76
COL4A1P02462 AC117434.1-201ENST00000419971 836 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 RPL23AP82-202ENST00000427528 469 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A1P02462 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A1P02462 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 AC090589.1-201ENST00000473109 362 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 RPS29P26-201ENST00000477483 171 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 Vault.1-201ENST00000516474 102 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
COL4A1P02462 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A1P02462 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A1P02462 AC139713.2-215ENST00000641428 5037 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 NCAPGP1-201ENST00000505112 1814 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A1P02462 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL4A1P02462 FAM35BP-202ENST00000497389 3337 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A1P02462 AC017007.4-201ENST00000503353 1352 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 U3.19-201ENST00000390893 196 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 U3.26-201ENST00000391236 204 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 AC023598.1-201ENST00000472521 361 ntBASIC4.06□□□□□ -1.76
COL4A1P02462 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.06□□□□□ -1.76
COL4A1P02462 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.06□□□□□ -1.76
COL4A1P02462 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A1P02462 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.06□□□□□ -1.76
COL4A1P02462 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
COL4A1P02462 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A1P02462 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
COL4A1P02462 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A1P02462 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A1P02462 SKP1P1-201ENST00000438081 489 ntBASIC4.05□□□□□ -1.76
COL4A1P02462 NPM1P29-201ENST00000483112 803 ntBASIC4.05□□□□□ -1.76
COL4A1P02462 AC011825.1-201ENST00000484967 388 ntBASIC4.05□□□□□ -1.76
COL4A1P02462 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A1P02462 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A1P02462 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A1P02462 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A1P02462 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.05□□□□□ -1.76
COL4A1P02462 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.05□□□□□ -1.76
COL4A1P02462 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL4A1P02462 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL4A1P02462 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COL4A1P02462 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.05□□□□□ -1.76
COL4A1P02462 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.05□□□□□ -1.76
COL4A1P02462 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COL4A1P02462 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A1P02462 AP000542.2-201ENST00000623199 6179 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL4A1P02462 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.04□□□□□ -1.76
COL4A1P02462 AL391417.1-201ENST00000404100 426 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.04□□□□□ -1.76
COL4A1P02462 AL831737.1-201ENST00000441288 271 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A1P02462 RPL23AP94-201ENST00000512518 302 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.04□□□□□ -1.76
COL4A1P02462 HIGD1AP1-201ENST00000550979 275 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.04□□□□□ -1.76
COL4A1P02462 AC023389.2-201ENST00000580031 955 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.04□□□□□ -1.76
COL4A1P02462 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL4A1P02462 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A1P02462 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A1P02462 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL4A1P02462 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL4A1P02462 AC010300.1-201ENST00000600671 5134 ntBASIC4.04□□□□□ -1.76
COL4A1P02462 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.04□□□□□ -1.76
COL4A1P02462 CR383658.2-201ENST00000547576 1525 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL4A1P02462 AL158071.1-201ENST00000430315 461 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.03□□□□□ -1.76
COL4A1P02462 RPL37P4-201ENST00000448908 268 ntBASIC4.03□□□□□ -1.76
COL4A1P02462 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.03□□□□□ -1.76
COL4A1P02462 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms