Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 AC092125.1-201ENST00000562568 1995 ntBASIC6.68□□□□□ -1.34
TMEM88BA6NKF7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 LCOR-201ENST00000286067 4542 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNU6-181P-201ENST00000363225 107 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNY1P12-201ENST00000364251 105 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNU6-1322P-201ENST00000364309 107 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNA5SP30-201ENST00000365552 115 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNU6-1293P-201ENST00000384077 107 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 MYL6P5-201ENST00000412707 459 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 FTH1P10-202ENST00000430907 550 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 snoU13.8-201ENST00000458890 104 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RPL5P12-201ENST00000477071 851 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNF138P1-201ENST00000502765 546 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 FTH1P24-201ENST00000503502 462 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC093767.1-201ENST00000504523 156 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNU6-445P-201ENST00000516949 107 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AP003181.2-201ENST00000528941 181 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC092490.3-201ENST00000545370 572 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 ATP5J2P6-201ENST00000565203 266 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC107954.1-201ENST00000565906 727 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC090616.5-202ENST00000582111 297 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL162413.1-201ENST00000603198 110 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL009028.1-201ENST00000604895 802 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC090607.5-201ENST00000615692 224 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 RNU6-156P-201ENST00000621869 107 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC000123.2-201ENST00000623124 461 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AL592148.3-201ENST00000608771 2646 ntBASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.67□□□□□ -1.34
TMEM88BA6NKF7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RN7SKP104-201ENST00000362605 328 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RNU6-483P-201ENST00000384088 108 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 RNU6-1226P-201ENST00000384317 107 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL359704.1-201ENST00000411586 781 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 OR10T1P-201ENST00000424327 947 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 OR51AB1P-201ENST00000429046 620 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AC119618.1-201ENST00000434191 222 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 LRRC34P2-201ENST00000514850 553 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AL110118.1-201ENST00000553543 400 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 AC090615.1-201ENST00000577519 154 ntBASIC6.66□□□□□ -1.34
TMEM88BA6NKF7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms