Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC116347.2-201ENST00000514912 523 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AP003392.2-201ENST00000527269 208 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AP005119.2-201ENST00000579735 1105 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 KPNA2P3-201ENST00000584190 848 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC011445.2-201ENST00000599274 173 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC012065.4-201ENST00000602445 679 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC138749.5-201ENST00000611461 208 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AL118522.2-201ENST00000616045 615 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC022306.2-201ENST00000617563 647 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 MIR6839-201ENST00000620425 113 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC015804.1-201ENST00000622935 435 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 AC135352.1-201ENST00000506173 1418 ntBASIC5.64□□□□□ -1.51
CCDC66A2RUB6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC66A2RUB6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RNU2-65P-201ENST00000410162 185 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RNA5SP178-201ENST00000410380 128 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RN7SKP206-201ENST00000410823 293 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC093155.2-201ENST00000420734 937 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RPL34P3-201ENST00000421454 338 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL365184.2-201ENST00000431139 435 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 MTND1P28-201ENST00000435623 950 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RPL36AP39-201ENST00000445859 318 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 SLC31A1P1-201ENST00000451221 567 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC096751.1-202ENST00000502691 1067 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC011411.1-201ENST00000509592 876 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 CYCSP22-201ENST00000517555 339 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 RNU6-88P-201ENST00000606801 100 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 AL592182.3-201ENST00000642132 3304 ntBASIC5.63□□□□□ -1.51
CCDC66A2RUB6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC66A2RUB6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 AC092435.4-201ENST00000623012 4159 ntBASIC5.62□□□□□ -1.51
CCDC66A2RUB6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 RNU6-433P-201ENST00000363216 104 ntBASIC5.62□□□□□ -1.51
CCDC66A2RUB6 RNU5F-7P-201ENST00000363696 115 ntBASIC5.62□□□□□ -1.51
CCDC66A2RUB6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 MIR506-201ENST00000384998 124 ntBASIC5.62□□□□□ -1.51
CCDC66A2RUB6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC66A2RUB6 RN7SKP33-201ENST00000410942 340 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms