Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA71.3-201ENST00000362582 128 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA73.2-201ENST00000364946 201 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORD3H-201ENST00000384486 214 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC093719.1-202ENST00000392735 373 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNU2-65P-201ENST00000410162 185 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPS29P4-201ENST00000414733 161 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC127526.1-201ENST00000417526 366 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC099336.2-201ENST00000422457 254 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC002075.2-201ENST00000425207 252 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPS26P47-201ENST00000427219 348 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OR4F13P-201ENST00000428478 931 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 Z74696.2-201ENST00000436514 498 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC099560.2-201ENST00000457554 255 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPL21P71-201ENST00000465598 459 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPL7L1P8-201ENST00000469911 741 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SCARNA14-201ENST00000516903 136 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC026403.1-201ENST00000518938 295 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 DUXAP2-201ENST00000519198 589 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AP000619.3-201ENST00000535634 1127 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC006960.3-201ENST00000561845 705 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 HNRNPCP4-201ENST00000571636 900 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MIR5187-201ENST00000583479 76 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL163642.2-201ENST00000604722 1019 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC019176.2-201ENST00000611579 315 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC004241.3-201ENST00000611728 517 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC084757.4-201ENST00000616350 526 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AP003400.2-201ENST00000624036 666 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC004777.1-201ENST00000624317 287 ntBASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CASC19-284ENST00000642142 1868 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC007529.1-201ENST00000418574 2178 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC007685.1-201ENST00000329806 452 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA81-201ENST00000408493 178 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC009237.5-201ENST00000414271 501 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CRYBB2P1-203ENST00000415709 538 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SEC63P1-201ENST00000425785 1258 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC006989.1-201ENST00000427212 131 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FTH1P6-201ENST00000430768 320 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 HSPD1P21-201ENST00000436541 245 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SNORA71B-202ENST00000439232 272 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RPS29P31-201ENST00000446147 164 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL157884.3-201ENST00000448273 1184 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 PDSS1P2-201ENST00000449397 678 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 EIF4A1P11-201ENST00000451239 222 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 PRSS3P4-201ENST00000453323 162 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AL645939.1-201ENST00000453429 797 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC099563.1-201ENST00000456086 418 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 NPM1P17-201ENST00000479221 602 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC115621.1-201ENST00000604653 858 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 RNVU1-4-201ENST00000612985 164 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC012314.7-201ENST00000619693 93 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC020978.9-201ENST00000624380 1141 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 AC009093.8-201ENST00000641769 292 ntBASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TCRBV4S1A1TA0A5B7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms