Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 AC004987.4-201ENST00000603383 338 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 DUXAP11-201ENST00000603858 526 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 AC010857.1-201ENST00000606398 594 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 AC090510.2-201ENST00000617465 629 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 AC068870.2-201ENST00000620635 389 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 CASC19-221ENST00000641309 1382 ntBASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.77□□□□□ -1.65
NECTIN3Q9NQS3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 SNORA74A-201ENST00000364089 198 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RN7SKP224-201ENST00000364140 325 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 SSXP10-201ENST00000402595 565 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AL450338.1-201ENST00000407987 512 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RNA5SP296-201ENST00000410523 111 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC073264.1-201ENST00000411508 416 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC090960.1-201ENST00000421072 306 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RPL23AP16-201ENST00000441715 421 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 VN1R10P-201ENST00000447106 875 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 MTCO3P11-201ENST00000455103 774 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC010350.1-201ENST00000504908 231 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC087359.1-201ENST00000508335 1740 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 RN7SKP82-201ENST00000516786 223 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ZNF705CP-201ENST00000530515 889 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 OR4A12P-201ENST00000530847 918 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC125611.1-201ENST00000549563 229 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC068446.3-201ENST00000555285 382 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC109446.2-201ENST00000567872 497 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC112220.3-201ENST00000605502 502 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC079248.2-201ENST00000623779 326 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC004943.3-201ENST00000624116 600 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 AC007671.2-201ENST00000637344 619 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 MAPK10-349ENST00000641767 3661 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ERCC6-202ENST00000374127 1782 ntBASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NECTIN3Q9NQS3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 MAPK10-286ENST00000641208 8747 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 MTCO1P14-201ENST00000441695 1559 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 SNORA58B-201ENST00000364259 136 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 SNORA66-201ENST00000384792 133 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 AC004987.3-201ENST00000413879 771 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 RPS3AP9-201ENST00000417027 792 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 AC013429.2-201ENST00000418798 781 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 TXNL1P1-201ENST00000429528 554 ntBASIC4.75□□□□□ -1.65
NECTIN3Q9NQS3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms