Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RN7SL273P-201ENST00000481561 299 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 NCOR1P1-202ENST00000486162 291 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 RN7SL170P-201ENST00000487098 295 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 NIPA2P2-201ENST00000496376 1083 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC084024.2-201ENST00000503480 791 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC113347.3-201ENST00000509113 148 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 TCP11X3P-202ENST00000514289 1254 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 RNA5SP271-201ENST00000516700 88 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 RN7SKP99-201ENST00000517028 307 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 SMARCE1P4-201ENST00000523647 241 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AP001207.1-201ENST00000524051 481 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC007954.1-201ENST00000554198 494 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 MIR4271-201ENST00000582451 67 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC012616.1-201ENST00000600294 197 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 BNIP3P9-201ENST00000603714 553 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL390208.1-201ENST00000605885 644 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AP005137.2-201ENST00000609238 400 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AL589743.7-201ENST00000612637 233 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC012414.7-202ENST00000622705 1090 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC073593.1-201ENST00000624500 411 ntBASIC5.35□□□□□ -1.55
VPS11Q9H270 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS11Q9H270 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS11Q9H270 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
VPS11Q9H270 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS11Q9H270 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS11Q9H270 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 RNU6-619P-201ENST00000365146 108 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 Z99497.1-201ENST00000421282 135 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC115283.1-201ENST00000427353 400 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 MED14P1-201ENST00000430517 648 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 RPL12P17-201ENST00000432393 498 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS11Q9H270 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 EIF4A1P11-201ENST00000451239 222 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS11Q9H270 DNAJB5P1-201ENST00000454004 806 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 RN7SL515P-201ENST00000463999 297 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 NIFKP7-201ENST00000503365 834 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 SCARNA16.4-201ENST00000516956 187 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS11Q9H270 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC127381.1-201ENST00000555979 939 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC093591.2-201ENST00000565254 3843 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 UBE2FP2-201ENST00000566646 462 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 MIR5708-201ENST00000579723 85 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 MIR3671-201ENST00000580455 88 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC022432.1-201ENST00000595739 310 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC027243.2-201ENST00000602530 724 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AP000942.4-201ENST00000604811 241 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC090578.1-201ENST00000604955 591 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC092354.1-201ENST00000606057 376 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 AC097505.1-201ENST00000610199 565 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AL118522.2-201ENST00000616045 615 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 BX005214.3-202ENST00000619809 325 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AC015908.5-201ENST00000623289 343 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 AP000648.2-201ENST00000624182 404 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 PCMTD1P7-201ENST00000634506 357 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 MIR4278-201ENST00000636094 69 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 MFSD8-245ENST00000641743 948 ntBASIC5.34□□□□□ -1.55
VPS11Q9H270 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS11Q9H270 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS11Q9H270 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
VPS11Q9H270 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.34□□□□□ -1.56
VPS11Q9H270 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
VPS11Q9H270 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms