Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC008958.1-201ENST00000511047 682 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 RNU6-488P-201ENST00000515918 99 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 RNA5SP315-201ENST00000516340 116 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 RNA5SP312-201ENST00000517068 116 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC006518.2-201ENST00000542513 940 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC010735.1-201ENST00000567305 1026 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 COX6CP4-201ENST00000605798 228 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 AC090506.2-201ENST00000624521 419 ntBASIC4.41□□□□□ -1.7
SIPA1Q96FS4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIPA1Q96FS4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SIPA1Q96FS4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIPA1Q96FS4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SIPA1Q96FS4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIPA1Q96FS4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIPA1Q96FS4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 RNU5B-1-201ENST00000363286 116 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 RNU1-64P-201ENST00000365443 163 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 DSTNP4-201ENST00000399472 474 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AL024507.1-201ENST00000412741 274 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 NRBF2P2-201ENST00000413087 861 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 RPS15AP40-201ENST00000419621 391 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 UBE2V1P1-201ENST00000430836 445 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 OR4C10P-201ENST00000434991 931 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC239367.2-201ENST00000447309 705 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC091959.2-201ENST00000477363 321 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC093801.2-201ENST00000503966 1050 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC087894.1-201ENST00000538359 518 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC104072.1-201ENST00000568817 668 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 BPTFP1-201ENST00000579209 492 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC126365.2-201ENST00000580630 379 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 DNAJC19P3-201ENST00000594491 331 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 AC009948.4-201ENST00000604692 675 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 SNORD91B-202ENST00000608459 222 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 MIR8069-1-201ENST00000616627 86 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 LINC00901.1-201ENST00000617252 152 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 MIR8059-201ENST00000620427 81 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 MIR8069-2-201ENST00000621412 86 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 BX649567.1-201ENST00000642071 1134 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.71
SIPA1Q96FS4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.4□□□□□ -1.71
SIPA1Q96FS4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 IL6STP1-201ENST00000346911 1020 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 RNU5B-4P-201ENST00000363508 111 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 RNU1-13P-201ENST00000384499 162 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 SNORA37-201ENST00000384504 129 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AL161909.1-201ENST00000397390 712 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 OR51A3P-201ENST00000413596 924 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 RPL31P45-201ENST00000419532 356 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 HSFY6P-201ENST00000445573 403 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 VN1R32P-201ENST00000452234 905 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AC026414.1-201ENST00000504046 698 ntBASIC4.39□□□□□ -1.71
SIPA1Q96FS4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.39□□□□□ -1.71
SIPA1Q96FS4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms