Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC010285.3-201ENST00000511668 676 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 OR4R3P-201ENST00000525084 838 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC141257.3-201ENST00000572906 215 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 ZNF415P1-201ENST00000582279 1166 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC006557.5-201ENST00000603126 811 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AL353684.1-201ENST00000622677 1120 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 BMS1P3-201ENST00000372011 932 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 HMGB3P18-201ENST00000406327 590 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC073657.2-201ENST00000605661 303 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 MIR8058-201ENST00000615737 89 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 MIR7112-201ENST00000616126 65 ntBASIC5.31□□□□□ -1.56
VPS8Q8N3P4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS8Q8N3P4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC006504.1-201ENST00000562493 3666 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AL357075.1-201ENST00000404107 726 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 KRR1P1-201ENST00000419430 803 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 BTF3P5-201ENST00000457252 467 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 CKS1BP3-201ENST00000600888 237 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 AC009464.1-201ENST00000615731 469 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 SNORD39.4-201ENST00000620099 78 ntBASIC5.3□□□□□ -1.56
VPS8Q8N3P4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS8Q8N3P4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 HSPA8P19-201ENST00000505359 1517 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 TNPO1P3-201ENST00000436471 2662 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 AC115115.1-201ENST00000449927 248 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 RPL21P10-201ENST00000463521 490 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 HMGB1P21-201ENST00000502313 581 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 AL159169.3-201ENST00000608871 561 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 MIR3651-201ENST00000630427 90 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.29□□□□□ -1.56
VPS8Q8N3P4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS8Q8N3P4 MTND5P1-201ENST00000445440 1375 ntBASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AC073346.2-201ENST00000624724 2058 ntBASIC5.28□□□□□ -1.56
VPS8Q8N3P4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AC063979.1-201ENST00000415539 377 ntBASIC5.28□□□□□ -1.56
VPS8Q8N3P4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AP000859.1-201ENST00000525536 307 ntBASIC5.28□□□□□ -1.56
VPS8Q8N3P4 DUX4L52-201ENST00000549363 777 ntBASIC5.28□□□□□ -1.56
VPS8Q8N3P4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS8Q8N3P4 CR383658.2-201ENST00000547576 1525 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 AC020633.1-201ENST00000468439 2247 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 RPF2P1-201ENST00000424137 906 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 RPS3AP12-201ENST00000443616 753 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 AC097262.1-201ENST00000452559 548 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 NCAPGP2-201ENST00000557911 754 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 AC019072.1-201ENST00000604535 1551 ntBASIC5.27□□□□□ -1.57
VPS8Q8N3P4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS8Q8N3P4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms