Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 U6.114-201ENST00000636407 96 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC011471.4-201ENST00000638271 216 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 OR7E161P-202ENST00000641994 1033 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC026523.2-201ENST00000625039 7739 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AL731556.1-201ENST00000394628 3711 ntBASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.31□□□□□ -1.4
DEPDC4Q8N2C3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SNORA70H-201ENST00000383910 135 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SNORA70J-201ENST00000384182 135 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL136372.1-201ENST00000403060 228 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL359715.1-201ENST00000404330 555 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL139100.1-201ENST00000408001 498 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MIR548F5-201ENST00000408421 86 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RNA5SP177-201ENST00000410122 107 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RPL37P10-201ENST00000412884 288 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL662791.3-201ENST00000413771 776 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC099336.2-201ENST00000422457 254 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC105402.2-201ENST00000438503 358 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RPS10P14-201ENST00000440748 502 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL161626.1-201ENST00000441480 490 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RPL21P133-201ENST00000443666 476 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC099560.2-201ENST00000457554 255 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RN7SL809P-201ENST00000482040 297 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC025164.1-201ENST00000496249 478 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 HMGB1P21-201ENST00000502313 581 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC138517.1-201ENST00000515724 568 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL137161.1-201ENST00000532231 390 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 APOOP3-201ENST00000536787 586 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC018630.1-201ENST00000541376 925 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL133153.1-201ENST00000557756 303 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL031846.1-201ENST00000560933 314 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AC019193.3-201ENST00000609144 554 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MIR8082-201ENST00000612488 81 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AL390240.1-201ENST00000612950 384 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
DEPDC4Q8N2C3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 AP000756.2-201ENST00000624168 2567 ntBASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
DEPDC4Q8N2C3 STAG3L4-201ENST00000352103 530 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms