Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 HMGB1P26-201ENST00000452520 628 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 IGKV2D-10-201ENST00000520194 281 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 MRPL49P2-201ENST00000521066 465 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC092747.2-201ENST00000545069 983 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC008121.2-201ENST00000614647 523 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC116563.2-201ENST00000624751 535 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC009951.1-201ENST00000623674 2614 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 CASC19-261ENST00000641853 1638 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC009501.3-201ENST00000605001 1352 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 RPL32P3-201ENST00000359025 275 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 CCNB2P1-201ENST00000399411 1150 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC016712.1-201ENST00000431088 378 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AL356276.2-201ENST00000435919 558 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 XKRY2-201ENST00000442362 1093 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC011037.1-201ENST00000483964 558 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC110792.1-201ENST00000491826 472 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 RPL7P47-201ENST00000497299 556 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 MIR4716-201ENST00000579628 84 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 RNU4-89P-201ENST00000607443 133 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC015802.5-201ENST00000607478 399 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC239803.2-201ENST00000610161 430 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC243654.2-201ENST00000612843 443 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC009318.3-201ENST00000616916 503 ntBASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC50Q8IVM0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 MIR184-201ENST00000384962 84 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 MTCO3P31-201ENST00000405526 789 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AL807761.1-201ENST00000417622 171 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AL160175.1-201ENST00000428124 247 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 HMGB3P8-201ENST00000449709 577 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 RPL21P11-201ENST00000461458 483 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC138701.1-201ENST00000524329 714 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AL389895.1-201ENST00000554127 252 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC011492.1-201ENST00000600023 315 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 BRDTP1-201ENST00000605735 677 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC006946.3-201ENST00000609791 756 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 RMST_8.1-201ENST00000610287 165 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC020978.9-201ENST00000624380 1141 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC091905.1-201ENST00000624400 311 ntBASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC50Q8IVM0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms