Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC005962.2-201ENST00000611427 652 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 MIR6716-201ENST00000613413 80 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AC104763.3-201ENST00000613765 618 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AC073530.2-201ENST00000623987 261 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX1Q15475 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX1Q15475 CASC19-261ENST00000641853 1638 ntBASIC4.03□□□□□ -1.77
SIX1Q15475 MFSD8-213ENST00000641134 1327 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SIX1Q15475 RNA5SP130-201ENST00000364431 114 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 RNU6-481P-201ENST00000384194 107 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 RNU4-31P-201ENST00000384211 141 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 MIR199A2-201ENST00000385289 110 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 ENSAP1-201ENST00000392855 326 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 RSL24D1P1-201ENST00000404972 493 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 AL445183.3-201ENST00000414168 502 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 RPL23AP38-201ENST00000423801 469 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AL035458.1-201ENST00000433096 585 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 Z74696.2-201ENST00000436514 498 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AL645931.1-201ENST00000439737 410 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX1Q15475 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX1Q15475 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX1Q15475 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC010618.1-201ENST00000469924 477 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AC103987.1-201ENST00000473394 348 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 RN7SKP157-201ENST00000516174 282 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC104115.2-201ENST00000523026 687 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX1Q15475 AL109741.3-201ENST00000561748 592 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC096553.1-201ENST00000605169 829 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AL023881.1-201ENST00000621088 301 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AC007275.1-201ENST00000621243 671 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AP003476.1-201ENST00000623984 516 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 AC091905.1-201ENST00000624400 311 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 OR52H1-202ENST00000641796 1061 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SIX1Q15475 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX1Q15475 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX1Q15475 AC005261.4-201ENST00000600047 1385 ntBASIC4.02□□□□□ -1.77
SIX1Q15475 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 RNU6-1000P-201ENST00000391066 106 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 OR6C69P-201ENST00000394268 893 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 ATP5F1P2-201ENST00000398143 760 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 UBE2V1P11-201ENST00000411559 285 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC013262.1-201ENST00000426710 252 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX1Q15475 RPL6P5-201ENST00000445678 828 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 MTATP6P14-201ENST00000455189 673 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC005798.1-201ENST00000513715 387 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 RNA5SP208-201ENST00000516156 78 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 SCARNA1-201ENST00000517138 166 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC092747.2-201ENST00000545069 983 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms