Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNA1P78396 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNA1P78396 RNU1-87P-201ENST00000363727 170 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.45□□□□□ -1.7
CCNA1P78396 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNA1P78396 OR4F13P-201ENST00000428478 931 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 NDUFA5P10-201ENST00000432147 357 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.45□□□□□ -1.7
CCNA1P78396 AL627224.1-201ENST00000448334 444 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNA1P78396 RN7SKP18-201ENST00000516005 275 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 SOD1P3-201ENST00000518682 454 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 HIGD1AP18-201ENST00000520730 278 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 OR4A2P-201ENST00000527276 913 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCNA1P78396 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCNA1P78396 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCNA1P78396 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNA1P78396 GTF2IP22-201ENST00000554443 182 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.45□□□□□ -1.7
CCNA1P78396 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.45□□□□□ -1.7
CCNA1P78396 AC096577.2-201ENST00000611455 153 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 MIR7973-1-201ENST00000614683 76 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC107905.1-201ENST00000616204 426 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC244517.3-201ENST00000616254 1235 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AL357559.1-201ENST00000622228 274 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCNA1P78396 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 AC138393.1-206ENST00000540997 1886 ntBASIC4.45□□□□□ -1.7
CCNA1P78396 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCNA1P78396 MARK2P15-201ENST00000432204 2186 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCNA1P78396 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCNA1P78396 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCNA1P78396 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCNA1P78396 AC007066.1-201ENST00000392902 381 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC068533.1-201ENST00000418542 415 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC114814.2-201ENST00000419195 485 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.44□□□□□ -1.7
CCNA1P78396 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.44□□□□□ -1.7
CCNA1P78396 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCNA1P78396 AL606490.7-201ENST00000433136 191 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 CBX1P4-201ENST00000439415 457 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.44□□□□□ -1.7
CCNA1P78396 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.44□□□□□ -1.7
CCNA1P78396 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.44□□□□□ -1.7
CCNA1P78396 PRDX3P3-201ENST00000447765 522 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC006517.1-201ENST00000480485 328 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.44□□□□□ -1.7
CCNA1P78396 AC106707.2-201ENST00000484182 374 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 DSTNP2-201ENST00000504533 515 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.44□□□□□ -1.7
CCNA1P78396 RN7SKP82-201ENST00000516786 223 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.44□□□□□ -1.7
CCNA1P78396 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.44□□□□□ -1.7
CCNA1P78396 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.44□□□□□ -1.7
CCNA1P78396 AC106785.3-201ENST00000564064 847 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 AC135803.1-201ENST00000608748 565 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 CR392039.4-201ENST00000624968 501 ntBASIC4.44□□□□□ -1.7
CCNA1P78396 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.43□□□□□ -1.7
CCNA1P78396 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 SNORA9-201ENST00000384215 133 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 MTND4P11-201ENST00000417020 1058 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 TCEA1P2-201ENST00000420496 906 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AL390879.2-203ENST00000426943 1121 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 SETD6P1-201ENST00000444575 317 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 RANP8-201ENST00000444720 713 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.43□□□□□ -1.7
CCNA1P78396 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.43□□□□□ -1.7
CCNA1P78396 HMGB1P26-201ENST00000452520 628 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 RPL7P48-201ENST00000461513 746 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AC018635.1-201ENST00000468292 1030 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 STMN1P2-201ENST00000508435 439 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 AC104619.4-201ENST00000510773 249 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 RNU6-1004P-201ENST00000516584 111 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCNA1P78396 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.43□□□□□ -1.7
CCNA1P78396 AC009303.3-201ENST00000591103 736 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.43□□□□□ -1.7
CCNA1P78396 AC055764.2-201ENST00000610089 670 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.43□□□□□ -1.7
CCNA1P78396 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms