Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.74□□□□□ -1.65
SUMO3P55854 AC146944.4-201ENST00000602697 718 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC007566.2-201ENST00000603642 413 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL391497.1-201ENST00000608671 547 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC037198.3-201ENST00000616754 526 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.74□□□□□ -1.65
SUMO3P55854 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.74□□□□□ -1.65
SUMO3P55854 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 CYP3A51P-201ENST00000633513 256 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.74□□□□□ -1.65
SUMO3P55854 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 AC011493.1-201ENST00000596753 1632 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 AC097504.1-201ENST00000515103 2415 ntBASIC4.74□□□□□ -1.65
SUMO3P55854 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SUMO3P55854 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SUMO3P55854 MTCO1P11-201ENST00000429111 1528 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 RPL23AP57-201ENST00000332361 466 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 U3.2-201ENST00000362981 210 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 RN7SKP269-201ENST00000365545 319 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 COX5BP7-201ENST00000414780 274 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC004448.2-201ENST00000422360 586 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AL365184.2-201ENST00000431139 435 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AL353706.1-201ENST00000436728 494 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AL136126.1-201ENST00000473603 402 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC087385.1-201ENST00000475062 312 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC093809.1-201ENST00000509155 340 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC060788.1-201ENST00000521318 469 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC068587.4-201ENST00000533893 186 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 OR5AN2P-201ENST00000534535 896 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.73□□□□□ -1.65
SUMO3P55854 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC141257.3-201ENST00000572906 215 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC119751.7-201ENST00000600494 245 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 RPL23AP92-201ENST00000603609 255 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC128687.1-201ENST00000605304 619 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 AC126915.2-201ENST00000610957 190 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 MIR6862-1-201ENST00000613016 70 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 MIR6862-2-201ENST00000614755 70 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 AC090582.1-201ENST00000636321 199 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 PABPC1P6-201ENST00000445594 1829 ntBASIC4.73□□□□□ -1.65
SUMO3P55854 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.73□□□□□ -1.65
SUMO3P55854 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.73□□□□□ -1.65
SUMO3P55854 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SUMO3P55854 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
SUMO3P55854 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SUMO3P55854 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SUMO3P55854 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SUMO3P55854 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SUMO3P55854 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms