Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXD11P31277 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXD11P31277 RNU6-527P-201ENST00000363425 104 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 SNORD115-8-201ENST00000363856 82 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 RNU6-105P-201ENST00000363909 104 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 SNORD115-38-201ENST00000365037 82 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 CRP-203ENST00000368111 512 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXD11P31277 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HOXD11P31277 RNU6-1336P-201ENST00000383886 109 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 U3.19-201ENST00000390893 196 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AL139100.1-201ENST00000408001 498 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 SSXP9-201ENST00000417503 292 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXD11P31277 RN7SL145P-201ENST00000469955 296 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 RN7SL745P-201ENST00000484900 299 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 RNA5SP490-201ENST00000517141 136 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 AC092868.1-201ENST00000557949 802 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AC007012.1-201ENST00000567192 175 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 MIR4724-201ENST00000579485 89 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXD11P31277 AL031274.2-201ENST00000599419 203 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 AC012640.5-201ENST00000623897 319 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 MIR3674-201ENST00000636576 68 ntBASIC8.66□□□□□ -1.02
HOXD11P31277 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HOXD11P31277 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXD11P31277 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HOXD11P31277 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
HOXD11P31277 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXD11P31277 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HOXD11P31277 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HOXD11P31277 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
HOXD11P31277 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 TMEM75-201ENST00000624314 2165 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 PSMC1P7-201ENST00000495689 1315 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 AC092268.1-201ENST00000342691 405 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXD11P31277 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
HOXD11P31277 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 RN7SKP53-201ENST00000411337 315 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXD11P31277 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXD11P31277 AL135790.2-201ENST00000437701 267 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 AC146507.2-201ENST00000460608 476 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 RN7SL308P-201ENST00000464971 297 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 AC139453.3-201ENST00000493276 369 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 IGKV2D-36-201ENST00000518643 226 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.65□□□□□ -1.02
HOXD11P31277 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.65□□□□□ -1.02
HOXD11P31277 SNORD115-40-201ENST00000606510 82 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
HOXD11P31277 AL121832.3-201ENST00000616512 3700 ntBASIC8.65□□□□□ -1.02
HOXD11P31277 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.65□□□□□ -1.02
HOXD11P31277 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXD11P31277 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXD11P31277 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
HOXD11P31277 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
HOXD11P31277 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.65□□□□□ -1.03
HOXD11P31277 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
HOXD11P31277 THAP12P5-201ENST00000405864 2275 ntBASIC8.65□□□□□ -1.03
HOXD11P31277 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
HOXD11P31277 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.65□□□□□ -1.03
HOXD11P31277 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
HOXD11P31277 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.64□□□□□ -1.03
HOXD11P31277 AC008124.1-201ENST00000609803 9730 ntBASIC8.64□□□□□ -1.03
HOXD11P31277 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
HOXD11P31277 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.64□□□□□ -1.03
HOXD11P31277 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 288.6 ms