Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 MIR6798-201ENST00000612887 67 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AL133173.2-201ENST00000614270 90 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 RNU6-156P-201ENST00000621869 107 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC000123.2-201ENST00000623124 461 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC073488.3-201ENST00000631611 778 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC010149.2-201ENST00000637608 315 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 MIR1321-201ENST00000637766 79 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 KPNA2P2-201ENST00000419546 1489 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 AC024560.2-201ENST00000507981 1497 ntBASIC5.38□□□□□ -1.55
HOXC12P31275 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC12P31275 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC12P31275 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 HSPA8P18-201ENST00000439846 1928 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HOXC12P31275 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 AL450326.2-201ENST00000421913 1962 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC011933.2-201ENST00000578539 2790 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 Y_RNA.38-201ENST00000362617 102 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RNU6-853P-201ENST00000364306 107 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RNU6-534P-201ENST00000364877 106 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RNU6-483P-201ENST00000384088 108 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 U3.25-201ENST00000391209 220 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AP003170.5-201ENST00000397185 335 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RPL7P25-201ENST00000404151 721 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC12P31275 AL121776.1-201ENST00000429337 372 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 MTCO2P11-201ENST00000431069 680 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 AC023141.3-201ENST00000436698 278 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 HMGN1P36-201ENST00000446623 298 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 RPL7P15-201ENST00000461190 712 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RPS26P39-201ENST00000469206 341 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC023598.1-201ENST00000472521 361 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 OR52A4P-201ENST00000472867 958 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RN7SL165P-201ENST00000477476 291 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC092865.4-201ENST00000477936 615 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RPL5P22-201ENST00000480199 884 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC034222.1-201ENST00000494052 532 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RPL30P11-201ENST00000495304 339 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 STMN1P2-201ENST00000508435 439 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 RNA5SP228-201ENST00000516232 133 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 RPA2P1-201ENST00000556557 721 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 MIR98-201ENST00000606724 119 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AC009994.1-201ENST00000606889 253 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC12P31275 OR10AB1P-201ENST00000609613 938 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 AL020991.1-201ENST00000612314 373 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC12P31275 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXC12P31275 AC069234.4-201ENST00000621276 412 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC12P31275 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC12P31275 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 AL354685.2-201ENST00000448218 1447 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 AC140134.1-201ENST00000511830 3544 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 SMG1P6-201ENST00000532337 2930 ntBASIC5.37□□□□□ -1.55
HOXC12P31275 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC12P31275 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HOXC12P31275 MFSD8-239ENST00000641590 2479 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms