Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AL161901.1-201ENST00000624954 3425 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 RNU6-238P-201ENST00000363313 106 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RNU6-1097P-201ENST00000363586 107 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RNU6-1188P-201ENST00000363795 107 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RNU6-169P-201ENST00000365336 107 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 SNORA20.2-201ENST00000383922 131 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 HMGB1P20-201ENST00000402555 677 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AL121835.1-201ENST00000404250 354 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC007562.1-201ENST00000421819 517 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RGS17P1-201ENST00000423358 553 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC126120.1-201ENST00000431082 470 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RPL34P6-201ENST00000432390 345 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 HMGB3P10-201ENST00000434734 572 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC104651.2-201ENST00000447549 528 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RPL12P25-201ENST00000455592 494 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AL356010.1-201ENST00000456364 102 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 Y_RNA.653-201ENST00000459091 95 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 TRBV8-2-201ENST00000475637 270 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RN7SL727P-201ENST00000482164 296 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 RN7SL184P-201ENST00000488308 297 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 RNU6-864P-201ENST00000516256 108 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 Y_RNA.682-201ENST00000516457 100 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 NARSP2-201ENST00000518524 679 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AP000827.1-201ENST00000527814 258 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 OR4T1P-201ENST00000554933 911 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC068831.4-201ENST00000556118 109 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC011468.4-201ENST00000603942 409 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AL355810.1-201ENST00000614629 552 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 CU639417.4-201ENST00000623928 207 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AC026634.1-201ENST00000634369 198 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 MTND5P28-201ENST00000438005 1594 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.03□□□□□ -1.28
ALDH1A1P00352 CUBNP3-201ENST00000457461 1784 ntBASIC7.03□□□□□ -1.28
ALDH1A1P00352 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ALDH1A1P00352 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.02□□□□□ -1.28
ALDH1A1P00352 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 RNU6-1115P-201ENST00000362490 106 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 Y_RNA.153-201ENST00000363615 91 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RNA5SP394-201ENST00000364216 119 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RNU6-996P-201ENST00000365438 107 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RNU6-171P-201ENST00000384354 107 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 MIR585-201ENST00000384887 94 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AL121972.1-201ENST00000402023 252 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RN7SKP158-201ENST00000410453 326 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC093151.1-201ENST00000427711 313 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 ARL5AP4-201ENST00000430731 512 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RPL21P23-201ENST00000446654 460 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 SLC25A51P1-201ENST00000468432 871 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC128713.1-201ENST00000471495 306 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC104687.1-201ENST00000485829 412 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RPSAP51-201ENST00000497462 645 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 SSX8-201ENST00000506270 579 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 RPL7P20-201ENST00000520308 745 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC243773.3-201ENST00000613270 256 ntBASIC7.02□□□□□ -1.29
ALDH1A1P00352 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.02□□□□□ -1.29
ALDH1A1P00352 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ALDH1A1P00352 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms