Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL356274.1-201ENST00000617064 410 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AF117829.1-206ENST00000621883 3802 ntBASIC1.55□□□□□ -2.16
USH2AO75445 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 AC099563.1-201ENST00000456086 418 ntBASIC1.55□□□□□ -2.16
USH2AO75445 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.55□□□□□ -2.16
USH2AO75445 OR4K7P-201ENST00000580232 945 ntBASIC1.55□□□□□ -2.16
USH2AO75445 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
USH2AO75445 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC1.55□□□□□ -2.16
USH2AO75445 DDX6P1-205ENST00000441966 1436 ntBASIC1.55□□□□□ -2.16
USH2AO75445 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
USH2AO75445 BCORP1-203ENST00000513194 5093 ntBASIC1.55□□□□□ -2.16
USH2AO75445 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.55□□□□□ -2.16
USH2AO75445 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 SNORA18.3-201ENST00000384122 132 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.54□□□□□ -2.16
USH2AO75445 AC091179.1-201ENST00000461606 579 ntBASIC1.54□□□□□ -2.16
USH2AO75445 RN7SL863P-201ENST00000462370 296 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC008489.1-201ENST00000524271 483 ntBASIC1.54□□□□□ -2.16
USH2AO75445 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USH2AO75445 CYCSP39-201ENST00000565821 309 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 MTCO1P8-201ENST00000416914 1523 ntBASIC1.54□□□□□ -2.16
USH2AO75445 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
USH2AO75445 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AL049780.3-201ENST00000624612 1583 ntBASIC1.54□□□□□ -2.16
USH2AO75445 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC1.54□□□□□ -2.16
USH2AO75445 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 RNA5SP424-201ENST00000390988 115 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL513174.1-201ENST00000423182 629 ntBASIC1.54□□□□□ -2.16
USH2AO75445 ATP5C1P1-201ENST00000441945 895 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 UBA52P3-201ENST00000491303 382 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.54□□□□□ -2.16
USH2AO75445 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AC025811.1-201ENST00000604312 472 ntBASIC1.54□□□□□ -2.16
USH2AO75445 IGHV3-29-201ENST00000604817 344 ntBASIC1.54□□□□□ -2.16
USH2AO75445 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AC134882.1-201ENST00000603738 1676 ntBASIC1.54□□□□□ -2.16
USH2AO75445 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AL645568.2-201ENST00000432815 1337 ntBASIC1.54□□□□□ -2.16
USH2AO75445 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AL360182.1-201ENST00000397433 468 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL139132.1-201ENST00000431587 344 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC093156.1-201ENST00000440382 670 ntBASIC1.54□□□□□ -2.16
USH2AO75445 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.54□□□□□ -2.16
USH2AO75445 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC1.54□□□□□ -2.16
USH2AO75445 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 AC128713.1-201ENST00000471495 306 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC117440.1-201ENST00000474107 571 ntBASIC1.54□□□□□ -2.16
USH2AO75445 RPL23AP65-201ENST00000475608 468 ntBASIC1.54□□□□□ -2.16
USH2AO75445 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 ACTR3BP1-201ENST00000605584 1247 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 AC005086.4-201ENST00000623065 213 ntBASIC1.54□□□□□ -2.16
USH2AO75445 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USH2AO75445 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 CEP170P1-201ENST00000502249 4587 ntBASIC1.54□□□□□ -2.16
USH2AO75445 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 AC093908.1-201ENST00000623125 8092 ntBASIC1.54□□□□□ -2.16
USH2AO75445 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USH2AO75445 MIR184-201ENST00000384962 84 ntBASIC1.54□□□□□ -2.16
USH2AO75445 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
USH2AO75445 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 AL139174.1-201ENST00000531489 886 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC1.54□□□□□ -2.16
USH2AO75445 AC097505.1-201ENST00000610199 565 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL354950.1-201ENST00000614150 568 ntBASIC1.54□□□□□ -2.16
USH2AO75445 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.54□□□□□ -2.16
USH2AO75445 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms